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Matthew D. Rasmussen
Matthew D. Rasmussen
Cornell University
Verified email at alum.mit.edu - Homepage
Title
Cited by
Cited by
Year
Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-18, 2007
22712007
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355-364, 2014
19962014
A high-resolution map of human evolutionary constraint using 29 mammals
K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ...
Nature 478 (7370), 476-482, 2011
12982011
Evolution of pathogenicity and sexual reproduction in eight Candida genomes
G Butler, MD Rasmussen, MF Lin, MAS Santos, S Sakthikumar, CA Munro, ...
Nature 459 (7247), 657-662, 2009
12272009
Rising rural body-mass index is the main driver of the global obesity epidemic in adults
Nature 569 (7755), 260-264, 2019
7982019
Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures
A Stark, MF Lin, P Kheradpour, JS Pedersen, L Parts, JW Carlson, ...
Nature 450 (7167), 219-232, 2007
7202007
Genome-wide inference of ancestral recombination graphs
MD Rasmussen, MJ Hubisz, I Gronau, A Siepel
PLoS genetics 10 (5), e1004342, 2014
3742014
Unified modeling of gene duplication, loss, and coalescence using a locus tree
MD Rasmussen, M Kellis
Genome research 22 (4), 755-765, 2012
1972012
Phylogenetic Identification and Functional Characterization of Orthologs and Paralogs across Human, Mouse, Fly, and Worm. bioRxiv. 2014
YC Wu, MS Bansal, MD Rasmussen
Publisher Full Text, 0
184
Aspergillus infection in lung transplant patients: incidence and prognosis
M Iversen, CM Burton, S Vand, L Skovfoged, J Carlsen, N Milman, ...
European Journal of Clinical Microbiology & Infectious Diseases 26, 879-886, 2007
1582007
A Bayesian approach for fast and accurate gene tree reconstruction
MD Rasmussen, M Kellis
Molecular Biology and Evolution 28 (1), 273-290, 2011
1402011
Effects of triptorelin versus placebo on the symptoms of endometriosis
MD Agneta Bergqvist, MD Thorbjörn Bergh, L Hogström, S Mattsson, ...
Fertility and sterility 69 (4), 702-708, 1998
1371998
gCLUTO--An interactive clustering, visualization, and analysis system
M Rasmussen, G Karypis
1342004
TreeFix: statistically informed gene tree error correction using species trees
YC Wu, MD Rasmussen, MS Bansal, M Kellis
Systematic biology 62 (1), 110-120, 2013
1272013
Accurate gene-tree reconstruction by learning gene-and species-specific substitution rates across multiple complete genomes
MD Rasmussen, M Kellis
Genome research 17 (12), 1932-1942, 2007
1092007
Most parsimonious reconciliation in the presence of gene duplication, loss, and deep coalescence using labeled coalescent trees
YC Wu, MD Rasmussen, MS Bansal, M Kellis
Genome research 24 (3), 475-486, 2014
812014
Performance and Scalability of Discriminative Metrics for Comparative Gene Identification in 12 Drosophila Genomes
MF Lin, AN Deoras, MD Rasmussen, M Kellis
PLoS computational biology 4 (4), e1000067, 2008
632008
Ancestor-to-ancestor relationship linking methods and systems
M Rasmussen, H Madsen, G Mangum
US Patent 8,786,603, 2014
602014
Evolution at the Subgene Level: Domain Rearrangements in the Drosophila Phylogeny
YC Wu, MD Rasmussen, M Kellis
Molecular biology and evolution 29 (2), 689-705, 2012
552012
Replacing and Additive Horizontal Gene Transfer in Streptococcus
SC Choi, MD Rasmussen, MJ Hubisz, I Gronau, MJ Stanhope, A Siepel
Molecular biology and evolution 29 (11), 3309-3320, 2012
492012
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