| Allocating modules to processors in a distributed system D Fernández-Baca IEEE Transactions on Software Engineering 15 (11), 1427-1436, 1989 | 656 | 1989 |
| A polynomial-time algorithm for the perfect phylogeny problem when the number of character states is fixed R Agarwala, D Fernández-Baca Proceedings of 1993 IEEE 34th Annual Foundations of Computer Science, 140-147, 1993 | 168 | 1993 |
| Robinson-foulds supertrees MS Bansal, JG Burleigh, O Eulenstein, D Fernández-Baca Algorithms for molecular biology 5, 1-12, 2010 | 123 | 2010 |
| iGTP: a software package for large-scale gene tree parsimony analysis R Chaudhary, MS Bansal, A Wehe, D Fernández-Baca, O Eulenstein BMC bioinformatics 11, 1-7, 2010 | 105 | 2010 |
| Fast algorithms for bipartite network flow D Gusfield, C Martel, D Fernandez-Baca SIAM Journal on Computing 16 (2), 237-251, 1987 | 89 | 1987 |
| Performance of flip supertree construction with a heuristic algorithm O Eulenstein, D Chen, JG Burleigh, D Fernández-Baca, MJ Sanderson Systematic Biology 53 (2), 299-308, 2004 | 87 | 2004 |
| Flipping: a supertree construction method D Chen, L Diao, O Eulenstein, D Fernández-Baca, M Sanderson DIMACS series in discrete mathematics and theoretical computer science 61 …, 2003 | 75 | 2003 |
| The perfect phylogeny problem D Fernández-Baca Steiner Trees in Industry, 203-234, 2001 | 60 | 2001 |
| Minimum-flip supertrees: complexity and algorithms D Chen, O Eulenstein, D Fernandez-Baca, M Sanderson IEEE/ACM transactions on computational biology and bioinformatics 3 (2), 165-173, 2006 | 59 | 2006 |
| Improved heuristics for minimum-flip supertree construction D Chen, O Eulenstein, D Fernández-Baca, JG Burleigh Evolutionary Bioinformatics 2, 117693430600200003, 2006 | 55 | 2006 |
| Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance R Chaudhary, JG Burleigh, D Fernández-Baca Algorithms for Molecular Biology 8, 1-12, 2013 | 50 | 2013 |
| Using sparsification for parametric minimum spanning tree problems D Fernández-Baca, G Slutzki, D Eppstein Algorithm Theory—SWAT'96: 5th Scandinavian Workshop on Algorithm Theory …, 1996 | 47 | 1996 |
| MulRF: a software package for phylogenetic analysis using multi-copy gene trees R Chaudhary, D Fernández-Baca, JG Burleigh Bioinformatics 31 (3), 432-433, 2015 | 46 | 2015 |
| A polynomial-time algorithm for near-perfect phylogeny D Fernández-Baca, J Lagergren SIAM Journal on Computing 32 (5), 1115-1127, 2003 | 43 | 2003 |
| Comparing and aggregating partially resolved trees MS Bansal, J Dong, D Fernández-Baca Theoretical Computer Science 412 (48), 6634-6652, 2011 | 39 | 2011 |
| MRF supertrees JG Burleigh, O Eulenstein, D Fernández-Baca, MJ Sanderson Phylogenetic Supertrees: Combining Information to Reveal the Tree of Life, 65-85, 2004 | 38 | 2004 |
| Supertrees by flipping D Chen, O Eulenstein, D Fernández-Baca, M Sanderson International Computing and Combinatorics Conference, 391-400, 2002 | 37 | 2002 |
| The future of legume genetic data resources: Challenges, opportunities, and priorities GJ Bauchet, KE Bett, CT Cameron, JD Campbell, EKS Cannon, ... Legume Science 1 (1), e16, 2019 | 35 | 2019 |
| Deep robust framework for protein function prediction using variable-length protein sequences A Ranjan, MS Fahad, D Fernández-Baca, A Deepak, S Tripathi IEEE/ACM Transactions on Computational Biology and Bioinformatics 17 (5 …, 2019 | 35 | 2019 |
| EvoMiner: frequent subtree mining in phylogenetic databases A Deepak, D Fernández-Baca, S Tirthapura, MJ Sanderson, ... Knowledge and Information Systems 41, 559-590, 2014 | 34 | 2014 |
