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Vanessa Aguiar-Pulido
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Metagenomics, metatranscriptomics, and metabolomics approaches for microbiome analysis: supplementary issue: bioinformatics methods and applications for big metagenomics data
V Aguiar-Pulido, W Huang, V Suarez-Ulloa, T Cickovski, K Mathee, ...
Evolutionary Bioinformatics 12, EBO. S36436, 2016
4892016
Secondary use and analysis of big data collected for patient care
FJ Martin-Sanchez, V Aguiar-Pulido, GH Lopez-Campos, N Peek, ...
Yearbook of medical informatics 26 (01), 28-37, 2017
702017
Random Forest classification based on star graph topological indices for antioxidant proteins
E Fernández-Blanco, V Aguiar-Pulido, CR Munteanu, J Dorado
Journal of theoretical biology 317, 331-337, 2013
602013
Threshold for neural tube defect risk by accumulated singleton loss-of-function variants
Z Chen, Y Lei, Y Zheng, V Aguiar-Pulido, ME Ross, R Peng, L Jin, ...
Cell research 28 (10), 1039-1041, 2018
522018
Star graphs of protein sequences and proteome mass spectra in cancer prediction
JM Vázquez, V Aguiar, JA Seoane, A Freire, JA Serantes, J Dorado, ...
Current Proteomics 6 (4), 275-288, 2009
432009
Genome-wide bioinformatic analyses predict key host and viral factors in SARS-CoV-2 pathogenesis
MG Ferrarini, A Lal, R Rebollo, AJ Gruber, A Guarracino, IM Gonzalez, ...
Communications biology 4 (1), 590, 2021
372021
Naïve Bayes QSDR classification based on spiral-graph Shannon entropies for protein biomarkers in human colon cancer
V Aguiar-Pulido, CR Munteanu, JA Seoane, E Fernandez-Blanco, ...
Molecular BioSystems 8 (6), 1716-1722, 2012
352012
Machine learning techniques for single nucleotide polymorphism—disease classification models in schizophrenia
V Aguiar-Pulido, JA Seoane, JR Rabuñal, J Dorado, A Pazos, ...
Molecules 15 (7), 4875-4889, 2010
352010
Evolutionary computation and QSAR research
V Aguiar-Pulido, M Gestal, M Cruz-Monteagudo, JR Rabunal, J Dorado, ...
Current computer-aided drug design 9 (2), 206-225, 2013
342013
The CHROMEVALOA database: a resource for the evaluation of Okadaic Acid contamination in the marine environment based on the chromatin-associated transcriptome of the mussel …
V Suárez-Ulloa, J Fernández-Tajes, V Aguiar-Pulido, C Rivera-Casas, ...
Marine Drugs 11 (3), 830-841, 2013
292013
Exploring patterns of epigenetic information with data mining techniques
V Aguiar-Pulido, J A Seoane, M Gestal, J Dorado
Current pharmaceutical design 19 (4), 779-789, 2013
212013
Unbiased high-throughput characterization of mussel transcriptomic responses to sublethal concentrations of the biotoxin okadaic acid
V Suarez-Ulloa, J Fernandez-Tajes, V Aguiar-Pulido, MV Prego-Faraldo, ...
PeerJ 3, e1429, 2015
202015
ATria: a novel centrality algorithm applied to biological networks
T Cickovski, E Peake, V Aguiar-Pulido, G Narasimhan
BMC bioinformatics 18, 1-10, 2017
182017
Single-cell sperm transcriptomes and variants from fathers of children with and without autism spectrum disorder
D Tomoiaga, V Aguiar-Pulido, S Shrestha, P Feinstein, SE Levy, ...
NPJ genomic medicine 5 (1), 14, 2020
172020
Systems biology analysis of human genomes points to key pathways conferring spina bifida risk
V Aguiar-Pulido, P Wolujewicz, A Martinez-Fundichely, E Elhaik, ...
Proceedings of the National Academy of Sciences 118 (51), e2106844118, 2021
142021
Biomedical data integration in computational drug design and bioinformatics
J A Seoane, V Aguiar-Pulido, C R Munteanu, D Rivero, J R Rabunal, ...
Current computer-aided drug design 9 (1), 108-117, 2013
142013
Loss of RAD9B impairs early neural development and contributes to the risk for human spina bifida
X Cao, T Tian, JW Steele, RM Cabrera, V Aguiar‐Pulido, S Wadhwa, ...
Human mutation 41 (4), 786-799, 2020
132020
Genome-wide investigation identifies a rare copy-number variant burden associated with human spina bifida
P Wolujewicz, V Aguiar-Pulido, A AbdelAleem, V Nair, G Thareja, K Suhre, ...
Genetics in Medicine 23 (7), 1211-1218, 2021
122021
Personalized epigenetics
TO Tollefsbol
Academic Press, 2015
112015
Using genetic algorithms for automatic recurrent ANN development: an application to EEG signal classification
D Rivero, V Aguiar-Pulido, E Fernandez-Blanco, M Gestal
International Journal of Data Mining, Modelling and Management 5 (2), 182-191, 2013
112013
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Articles 1–20