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Ugis Sarkans
Ugis Sarkans
Technical team leader, EMBL-EBI
Verified email at ebi.ac.uk
Title
Cited by
Cited by
Year
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data
A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ...
Nature genetics 29 (4), 365-371, 2001
49652001
ArrayExpress—a public repository for microarray gene expression data at the EBI
A Brazma, H Parkinson, U Sarkans, M Shojatalab, J Vilo, ...
Nucleic acids research 31 (1), 68-71, 2003
11372003
ArrayExpress—a public database of microarray experiments and gene expression profiles
H Parkinson, M Kapushesky, M Shojatalab, N Abeygunawardena, ...
Nucleic acids research 35 (suppl_1), D747-D750, 2007
8402007
ArrayExpress update—simplifying data submissions
N Kolesnikov, E Hastings, M Keays, O Melnichuk, YA Tang, E Williams, ...
Nucleic acids research 43 (D1), D1113-D1116, 2015
8282015
The HUPO PSI's molecular interaction format—a community standard for the representation of protein interaction data
H Hermjakob, L Montecchi-Palazzi, G Bader, J Wojcik, L Salwinski, ...
Nature biotechnology 22 (2), 177-183, 2004
7642004
Design and implementation of microarray gene expression markup language (MAGE-ML)
PT Spellman, M Miller, J Stewart, C Troup, U Sarkans, S Chervitz, ...
Genome biology 3, 1-9, 2002
6002002
ArrayExpress update–from bulk to single-cell expression data
A Athar, A Füllgrabe, N George, H Iqbal, L Huerta, A Ali, C Snow, ...
Nucleic acids research 47 (D1), D711-D715, 2019
5782019
ArrayExpress update—from an archive of functional genomics experiments to the atlas of gene expression
H Parkinson, M Kapushesky, N Kolesnikov, G Rustici, M Shojatalab, ...
Nucleic acids research 37 (suppl_1), D868-D872, 2009
5122009
ArrayExpress—a public repository for microarray gene expression data at the EBI
H Parkinson, U Sarkans, M Shojatalab, N Abeygunawardena, S Contrino, ...
Nucleic acids research 33 (suppl_1), D553-D555, 2005
4742005
ArrayExpress update—trends in database growth and links to data analysis tools
G Rustici, N Kolesnikov, M Brandizi, T Burdett, M Dylag, I Emam, A Farne, ...
Nucleic acids research 41 (D1), D987-D990, 2012
4332012
ArrayExpress update—an archive of microarray and high-throughput sequencing-based functional genomics experiments
H Parkinson, U Sarkans, N Kolesnikov, N Abeygunawardena, T Burdett, ...
Nucleic acids research 39 (suppl_1), D1002-D1004, 2010
3912010
Image Data Resource: a bioimage data integration and publication platform
E Williams, J Moore, SW Li, G Rustici, A Tarkowska, A Chessel, S Leo, ...
Nature methods 14 (8), 775-781, 2017
2782017
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB
TF Rayner, P Rocca-Serra, PT Spellman, HC Causton, A Farne, ...
BMC bioinformatics 7, 1-18, 2006
2712006
Biomarkers in autism spectrum disorder: the old and the new
B Ruggeri, U Sarkans, G Schumann, AM Persico
Psychopharmacology 231, 1201-1216, 2014
2242014
Standards for systems biology
A Brazma, M Krestyaninova, U Sarkans
Nature Reviews Genetics 7 (8), 593-605, 2006
1862006
Discovering and linking public omics data sets using the Omics Discovery Index
Y Perez-Riverol, M Bai, F da Veiga Leprevost, S Squizzato, YM Park, ...
Nature biotechnology 35 (5), 406-409, 2017
1822017
Human metabolic profiles are stably controlled by genetic and environmental variation
G Nicholson, M Rantalainen, AD Maher, JV Li, D Malmodin, KR Ahmadi, ...
Molecular systems biology 7 (1), 525, 2011
1732011
Expression Profiler: next generation—an online platform for analysis of microarray data
M Kapushesky, P Kemmeren, AC Culhane, S Durinck, J Ihmels, C Körner, ...
Nucleic acids research 32 (suppl_2), W465-W470, 2004
1572004
A genome-wide metabolic QTL analysis in Europeans implicates two loci shaped by recent positive selection
G Nicholson, M Rantalainen, JV Li, AD Maher, D Malmodin, KR Ahmadi, ...
PLoS genetics 7 (9), e1002270, 2011
1422011
The BioStudies database—one stop shop for all data supporting a life sciences study
U Sarkans, M Gostev, A Athar, E Behrangi, O Melnichuk, A Ali, J Minguet, ...
Nucleic acids research 46 (D1), D1266-D1270, 2018
1382018
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