An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57-74, 2012 | 13916 | 2012 |
An “Electronic Fluorescent Pictograph” browser for exploring and analyzing large-scale biological data sets D Winter, B Vinegar, H Nahal, R Ammar, GV Wilson, NJ Provart PloS one 2 (8), e718, 2007 | 2820 | 2007 |
Tissue-Resident Macrophage Enhancer Landscapes Are Shaped by the Local Microenvironment Y Lavin, D Winter, R Blecher-Gonen, E David, H Keren-Shaul, M Merad, ... Cell 159 (6), 1312-1326, 2014 | 2152 | 2014 |
A user's guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS biology 9 (4), e1001046, 2011 | 1445 | 2011 |
Transcriptional heterogeneity and lineage commitment in myeloid progenitors F Paul, Y Arkin, A Giladi, DA Jaitin, E Kenigsberg, H Keren-Shaul, ... Cell 163 (7), 1663-1677, 2015 | 1130 | 2015 |
Microglia development follows a stepwise program to regulate brain homeostasis O Matcovitch-Natan, DR Winter, A Giladi, SV Aguilar, A Spinrad, ... Science, aad8670, 2016 | 1110 | 2016 |
Single-cell transcriptomic analysis of human lung provides insights into the pathobiology of pulmonary fibrosis PA Reyfman, JM Walter, N Joshi, KR Anekalla, AC McQuattie-Pimentel, ... American journal of respiratory and critical care medicine 199 (12), 1517-1536, 2019 | 1023 | 2019 |
Chromatin state dynamics during blood formation D Lara-Astiaso, A Weiner, E Lorenzo-Vivas, I Zaretsky, DA Jaitin, E David, ... Science 345 (6199), 943-949, 2014 | 825 | 2014 |
Microbiota Diurnal Rhythmicity Programs Host Transcriptome Oscillations CA Thaiss, M Levy, T Korem, L Dohnalová, H Shapiro, DA Jaitin, E David, ... Cell 167 (6), 1495-1510. e12, 2016 | 702 | 2016 |
Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity L Song, Z Zhang, LL Grasfeder, AP Boyle, PG Giresi, BK Lee, ... Genome research 21 (10), 1757-1767, 2011 | 624 | 2011 |
The Spectrum and Regulatory Landscape of Intestinal Innate Lymphoid Cells Are Shaped by the Microbiome M Gury-BenAri, CA Thaiss, N Serafini, DR Winter, A Giladi, D Lara-Astiaso, ... Cell 166 (5), 1231-1246. e13, 2016 | 549 | 2016 |
The role of the local environment and epigenetics in shaping macrophage identity and their effect on tissue homeostasis I Amit, DR Winter, S Jung Nature Immunology 17 (1), 18-25, 2016 | 404 | 2016 |
Mef2C restrains microglial inflammatory response and is lost in brain ageing in an IFN-I-dependent manner A Deczkowska, O Matcovitch-Natan, A Tsitsou-Kampeli, S Ben-Hamo, ... Nature Communications 8, 2017 | 211 | 2017 |
Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin level EA Rach, DR Winter, AM Benjamin, DL Corcoran, T Ni, J Zhu, U Ohler PLoS genetics 7 (1), e1001274, 2011 | 161 | 2011 |
A Beginner's Guide to Analysis of RNA-seq Data CM Koch, SF Chiu, M Akbarpour, A Bharat, KM Ridge, ET Bartom, ... American Journal of Respiratory Cell and Molecular Biology, 2018 | 138 | 2018 |
The lung microenvironment shapes a dysfunctional response of alveolar macrophages in aging AC McQuattie-Pimentel, Z Ren, N Joshi, S Watanabe, T Stoeger, M Chi, ... The Journal of Clinical Investigation 131 (4), 2021 | 119 | 2021 |
Co-ChIP enables genome-wide mapping of histone mark co-occurrence at single-molecule resolution A Weiner, D Lara-Astiaso, V Krupalnik, O Gafni, E David, DR Winter, ... Nature Biotechnology 34 (9), 953-961, 2016 | 99 | 2016 |
Extracellular Matrix Proteolysis by MT1-MMP Contributes to Influenza-Related Tissue Damage and Mortality D Talmi-Frank, Z Altboum, I Solomonov, Y Udi, DA Jaitin, M Klepfish, ... Cell Host & Microbe 20 (4), 458-470, 2016 | 92 | 2016 |
Distinct Murine Mucosal Langerhans Cell Subsets Develop from Pre-dendritic Cells and Monocytes T Capucha, G Mizraji, H Segev, R Blecher-Gonen, D Winter, A Khalaileh, ... Immunity 43 (2), 369-381, 2015 | 82 | 2015 |
A Negative Feedback Loop of Transcription Factors Specifies Alternative Dendritic Cell Chromatin States C Bornstein, D Winter, Z Barnett-Itzhaki, E David, S Kadri, M Garber, I Amit Molecular cell 56 (6), 749-762, 2014 | 71 | 2014 |