PRISM 3: expanded prediction of natural product chemical structures from microbial genomes MA Skinnider, NJ Merwin, CW Johnston, NA Magarvey Nucleic acids research 45 (W1), W49-W54, 2017 | 332 | 2017 |
Genomes to natural products prediction informatics for secondary metabolomes (PRISM) MA Skinnider, CA Dejong, PN Rees, CW Johnston, H Li, ALH Webster, ... Nucleic acids research 43 (20), 9645-9662, 2015 | 308 | 2015 |
Gold biomineralization by a metallophore from a gold-associated microbe CW Johnston, MA Wyatt, X Li, A Ibrahim, J Shuster, G Southam, ... Nature chemical biology 9 (4), 241-243, 2013 | 273 | 2013 |
Duodenal bacteria from patients with celiac disease and healthy subjects distinctly affect gluten breakdown and immunogenicity A Caminero, HJ Galipeau, JL McCarville, CW Johnston, SP Bernier, ... Gastroenterology 151 (4), 670-683, 2016 | 234 | 2016 |
Comprehensive prediction of secondary metabolite structure and biological activity from microbial genome sequences MA Skinnider, CW Johnston, M Gunabalasingam, NJ Merwin, ... Nature communications 11 (1), 6058, 2020 | 212 | 2020 |
Genomic charting of ribosomally synthesized natural product chemical space facilitates targeted mining MA Skinnider, CW Johnston, RE Edgar, CA Dejong, NJ Merwin, PN Rees, ... Proceedings of the National Academy of Sciences 113 (42), E6343-E6351, 2016 | 164 | 2016 |
Polyketide and nonribosomal peptide retro-biosynthesis and global gene cluster matching CA Dejong, GM Chen, H Li, CW Johnston, MR Edwards, PN Rees, ... Nature chemical biology 12 (12), 1007-1014, 2016 | 150 | 2016 |
An automated Genomes-to-Natural Products platform (GNP) for the discovery of modular natural products CW Johnston, MA Skinnider, MA Wyatt, X Li, MRM Ranieri, L Yang, ... Nature communications 6 (1), 8421, 2015 | 133 | 2015 |
Assembly and clustering of natural antibiotics guides target identification CW Johnston, MA Skinnider, CA Dejong, PN Rees, GM Chen, CG Walker, ... Nature chemical biology 12 (4), 233-239, 2016 | 108 | 2016 |
DeepRiPP integrates multiomics data to automate discovery of novel ribosomally synthesized natural products NJ Merwin, WK Mousa, CA Dejong, MA Skinnider, MJ Cannon, H Li, ... Proceedings of the National Academy of Sciences 117 (1), 371-380, 2020 | 104 | 2020 |
Dereplicating nonribosomal peptides using an informatic search algorithm for natural products (iSNAP) discovery A Ibrahim, L Yang, C Johnston, X Liu, B Ma, NA Magarvey Proceedings of the National Academy of Sciences 109 (47), 19196-19201, 2012 | 81 | 2012 |
Global analysis of prokaryotic tRNA-derived cyclodipeptide biosynthesis MA Skinnider, CW Johnston, NJ Merwin, CA Dejong, NA Magarvey BMC genomics 19, 1-11, 2018 | 33 | 2018 |
Continuous bioactivity-dependent evolution of an antibiotic biosynthetic pathway CW Johnston, AH Badran, JJ Collins Nature communications 11 (1), 4202, 2020 | 30 | 2020 |
Structural and chemical characterization of placer gold grains: implications for bacterial contributions to grain formation J Shuster, CW Johnston, NA Magarvey, RA Gordon, K Barron, ... Geomicrobiology Journal 32 (2), 158-169, 2015 | 30 | 2015 |
Nonribosomal assembly of natural lipocyclocarbamate lipoprotein-associated phospholipase inhibitors. CW Johnston, R Zvanych, N Khyzha, NA Magarvey Chembiochem: a European Journal of Chemical Biology 14 (4), 431-435, 2013 | 29 | 2013 |
Gold nanoparticle formation via microbial metallophore chemistries MA Wyatt, CW Johnston, NA Magarvey Journal of nanoparticle research 16, 1-7, 2014 | 24 | 2014 |
Exploration of nonribosomal peptide families with an automated informatic search algorithm L Yang, A Ibrahim, CW Johnston, MA Skinnider, B Ma, NA Magarvey Chemistry & biology 22 (9), 1259-1269, 2015 | 15 | 2015 |
Automated identification of depsipeptide natural products by an informatic search algorithm MA Skinnider, CW Johnston, R Zvanych, NA Magarvey ChemBioChem 16 (2), 223-227, 2015 | 14 | 2015 |
Informatic analysis reveals Legionella as a source of novel natural products CW Johnston, J Plumb, X Li, S Grinstein, NA Magarvey Synthetic and Systems Biotechnology 1 (2), 130-136, 2016 | 13 | 2016 |
Informatic strategies for the discovery of polyketides and nonribosomal peptides C Johnston, A Ibrahim, N Magarvey MedChemComm 3 (8), 932-937, 2012 | 11 | 2012 |