Lambros T. Koufariotis
Lambros T. Koufariotis
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Whole-genome sequencing of acral melanoma reveals genomic complexity and diversity
F Newell, JS Wilmott, PA Johansson, K Nones, V Addala, ...
Nature communications 11 (1), 5259, 2020
Whole genome landscapes of uveal melanoma show an ultraviolet radiation signature in iris tumours
PA Johansson, K Brooks, F Newell, JM Palmer, JS Wilmott, AL Pritchard, ...
Nature Communications 11 (1), 2408, 2020
CD155 on tumor cells drives resistance to immunotherapy by inducing the degradation of the activating receptor CD226 in CD8+ T cells
M Braun, AR Aguilera, A Sundarrajan, D Corvino, K Stannard, S Krumeich, ...
Immunity 53 (4), 805-823. e15, 2020
A catalogue of novel bovine long noncoding RNA across 18 tissues
LT Koufariotis, YPP Chen, A Chamberlain, C Vander Jagt, BJ Hayes
PloS one 10 (10), e0141225, 2015
Multiomic profiling of checkpoint inhibitor-treated melanoma: Identifying predictors of response and resistance, and markers of biological discordance
F Newell, IP da Silva, PA Johansson, AM Menzies, JS Wilmott, V Addala, ...
Cancer cell 40 (1), 88-102. e7, 2022
Regulatory and coding genome regions are enriched for trait associated variants in dairy and beef cattle
L Koufariotis, YPP Chen, S Bolormaa, BJ Hayes
BMC genomics 15, 1-16, 2014
Sequencing the mosaic genome of Brahman cattle identifies historic and recent introgression including polled
L Koufariotis, BJ Hayes, M Kelly, BM Burns, R Lyons, P Stothard, ...
Scientific reports 8 (1), 17761, 2018
Verifying explainability of a deep learning tissue classifier trained on RNA-seq data
M Yap, RL Johnston, H Foley, S MacDonald, O Kondrashova, KA Tran, ...
Scientific reports 11 (1), 2641, 2021
Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory
MSF Soon, HJ Lee, JA Engel, J Straube, BS Thomas, CPS Pernold, ...
Nature Immunology 21 (12), 1597-1610, 2020
DNA methylation patterns identify subgroups of pancreatic neuroendocrine tumors with clinical association
V Lakis, RT Lawlor, F Newell, AM Patch, A Mafficini, A Sadanandam, ...
Communications biology 4 (1), 155, 2021
Comprehensive genomic and tumour immune profiling reveals potential therapeutic targets in malignant pleural mesothelioma
J Creaney, AM Patch, V Addala, SA Sneddon, K Nones, IM Dick, YCG Lee, ...
Genome Medicine 14 (1), 58, 2022
CRISPR/Cas9-mediated genome editing of Schistosoma mansoni acetylcholinesterase
H You, JU Mayer, RL Johnston, H Sivakumaran, S Ranasinghe, V Rivera, ...
bioRxiv, 2020.07. 08.190694, 2020
Comparative genomics provides etiologic and biological insight into melanoma subtypes
F Newell, PA Johansson, JS Wilmott, K Nones, V Lakis, AL Pritchard, ...
Cancer discovery 12 (12), 2856-2879, 2022
Non-coding RNAs underlie genetic predisposition to breast cancer
M Moradi Marjaneh, J Beesley, TA O’Mara, P Mukhopadhyay, ...
Genome biology 21, 1-14, 2020
Patient-derived xenograft models capture genomic heterogeneity in endometrial cancer
VF Bonazzi, O Kondrashova, D Smith, K Nones, AT Sengal, R Ju, ...
Genome Medicine 14, 1-19, 2022
Radiomics biomarkers correlate with CD8 expression and predict immune signatures in melanoma patients
LG Aoude, BZY Wong, VF Bonazzi, S Brosda, SB Walters, LT Koufariotis, ...
Molecular Cancer Research 19 (6), 950-956, 2021
Donor bone marrow–derived macrophage MHC II drives neuroinflammation and altered behavior during chronic GVHD in mice
RC Adams, D Carter-Cusack, SN Shaikh, GT Llanes, RL Johnston, ...
Blood, The Journal of the American Society of Hematology 139 (9), 1389-1408, 2022
Alterations in signaling pathways that accompany spontaneous transition to malignancy in a mouse model of BRAF mutant microsatellite stable colorectal cancer
AM Kane, LJ Fennell, C Liu, J Borowsky, DM McKeone, CE Bond, ...
Neoplasia 22 (2), 120-128, 2020
IL-10-producing Th1 cells possess a distinct molecular signature in malaria
CL Edwards, SS Ng, F de Labastida Rivera, D Corvino, JA Engel, ...
The Journal of clinical investigation 133 (1), 2023
Pathogenic germline variants are associated with poor survival in stage III/IV melanoma patients
LG Aoude, VF Bonazzi, S Brosda, K Patel, LT Koufariotis, H Oey, K Nones, ...
Scientific Reports 10 (1), 17687, 2020
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