| A large-scale evaluation of computational protein function prediction P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ... Nature methods 10 (3), 221-227, 2013 | 1111 | 2013 |
| Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis SB Goodwin, S Ben M'Barek, B Dhillon, AHJ Wittenberg, CF Crane, ... PLoS genetics 7 (6), e1002070, 2011 | 587 | 2011 |
| Bayesian Markov Random Field analysis for protein function prediction based on network data YAI Kourmpetis, ADJ Van Dijk, MCAM Bink, RCHJ van Ham, ... PloS one 5 (2), e9293, 2010 | 123 | 2010 |
| In silico characterization and molecular evolutionary analysis of a novel superfamily of fungal effector proteins I Stergiopoulos, YAI Kourmpetis, JC Slot, FT Bakker, PJGM De Wit, ... Molecular Biology and Evolution 29 (11), 3371-3384, 2012 | 104 | 2012 |
| Gene regulatory networks from multifactorial perturbations using Graphical Lasso: application to the DREAM4 challenge P Menéndez, YAI Kourmpetis, CJF ter Braak, FA van Eeuwijk PloS one 5 (12), e14147, 2010 | 88 | 2010 |
| Demography and mating system shape the genome-wide impact of purifying selection in Arabis alpina B Laenen, A Tedder, MD Nowak, P Toräng, J Wunder, S Wötzel, ... Proceedings of the National Academy of Sciences 115 (4), 816-821, 2018 | 72 | 2018 |
| MitoRS, a method for high throughput, sensitive, and accurate detection of mitochondrial DNA heteroplasmy J Marquis, G Lefebvre, YAI Kourmpetis, M Kassam, F Ronga, U De Marchi, ... BMC genomics 18, 1-19, 2017 | 51 | 2017 |
| Genome-wide computational function prediction of Arabidopsis proteins by integration of multiple data sources YAI Kourmpetis, ADJ van Dijk, RCHJ van Ham, CJF ter Braak Plant physiology 155 (1), 271-281, 2011 | 45 | 2011 |
| The turbulent life of Sirevirus retrotransposons and the evolution of the maize genome: more than ten thousand elements tell the story A Bousios, YAI Kourmpetis, P Pavlidis, E Minga, A Tsaftaris, N Darzentas The Plant Journal 69 (3), 475-488, 2012 | 40 | 2012 |
| Approximating a similarity matrix by a latent class model: a reappraisal of additive fuzzy clustering CJF Ter Braak, Y Kourmpetis, HAL Kiers, MCAM Bink Computational Statistics & Data Analysis 53 (8), 3183-3193, 2009 | 27 | 2009 |
| Gene Ontology consistent protein function prediction: the FALCON algorithm applied to six eukaryotic genomes YAI Kourmpetis, ADJ van Dijk, CJ Ter Braak Algorithms for Molecular Biology 8, 1-9, 2013 | 16 | 2013 |
| The use of multiple hierarchically independent Gene Ontology terms in gene function prediction and genome annotation YAI Kourmpetis, A Van Der Burgt, MCAM Bink, CJF Ter Braak, ... In silico biology 7 (6), 575-582, 2007 | 8 | 2007 |
| A comparative fluctuating asymmetry study between two walnut (Juglans regia L.) populations may contribute as an early signal for bio-monitoring YAI Kourmpetis, FA Aravanopoulos iForest-Biogeosciences and Forestry 3 (6), 150, 2010 | 5 | 2010 |
| Adaptation of perennial flowering phenology across the European range of Arabis alpina J Wunder, A Fulgione, P Toräng, S Wötzel, M Herzog, JR Obeso, ... Proceedings of the Royal Society B 290 (2011), 20231401, 2023 | 1 | 2023 |
| Supplementary Tables from Adaptation of perennial flowering phenology across the European range of Arabis alpina J Wunder, A Fulgione, P Toräng, S Wötzel, M Herzog, JR Obeso Suárez, ... Figshare, 2023 | | 2023 |
| Bayesian Markov random field analysis for integrated network-based protein function prediction YAI Kourmpetis PQDT-Global, 2011 | | 2011 |
| Approximating a similarity matrix by a latent class model CJF ter Braak, Y Kourmpetis, HAL Kiers, MCAM Bink, CJF ter Braak, ... | | |
Cajo J.F. ter BraakBiometris (Applied Statistics, Statistical Ecology) Wageningen University & Research, NetherlandsVerified email at wur.nl
