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Brian Oakley
Brian Oakley
Professor, College of Veterinary Medicine, Western University of Health Sciences, Pomona, CA
Verified email at westernu.edu - Homepage
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Cited by
Year
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ...
Applied and environmental microbiology 75 (23), 7537-7541, 2009
182192009
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
CA Francis, KJ Roberts, JM Beman, AE Santoro, BB Oakley
Proceedings of the National Academy of Sciences 102 (41), 14683-14688, 2005
23922005
The chicken gastrointestinal microbiome
BB Oakley, HS Lillehoj, MH Kogut, WK Kim, JJ Maurer, A Pedroso, ...
FEMS microbiology letters 360 (2), 100-112, 2014
5582014
Targeted PCR for detection of vaginal bacteria associated with bacterial vaginosis
DN Fredricks, TL Fiedler, KK Thomas, BB Oakley, JM Marrazzo
Journal of clinical microbiology 45 (10), 3270-3276, 2007
4912007
Diversity of human vaginal bacterial communities and associations with clinically defined bacterial vaginosis
BB Oakley, TL Fiedler, JM Marrazzo, DN Fredricks
Applied and environmental microbiology 74 (15), 4898-4909, 2008
3322008
Chicken gut microbiota: importance and detection technology
Y Shang, S Kumar, B Oakley, WK Kim
Frontiers in Veterinary Science 5, 254, 2018
2432018
Diazotrophic endophytes of native black cottonwood and willow
SL Doty, B Oakley, G Xin, JW Kang, G Singleton, Z Khan, A Vajzovic, ...
Symbiosis 47 (1), 23-33, 2009
2292009
Spatial variability in microclimate in a mixed-conifer forest before and after thinning and burning treatments
S Ma, A Concilio, B Oakley, M North, J Chen
Forest Ecology and Management 259 (5), 904-915, 2010
2062010
Spatial and temporal changes in the broiler chicken cecal and fecal microbiomes and correlations of bacterial taxa with cytokine gene expression
BB Oakley, MH Kogut
Frontiers in veterinary science 3, 11, 2016
1682016
Inferring the evolutionary history of the plant pathogen Pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand
CE Morris, DC Sands, JL Vanneste, J Montarry, B Oakley, C Guilbaud, ...
MBio 1 (3), e00107-10, 2010
1492010
Forest stand structure and pattern of old-growth western hemlock/Douglas-fir and mixed-conifer forests
M North, J Chen, B Oakley, B Song, M Rudnicki, A Gray, J Innes
Forest Science 50 (3), 299-311, 2004
1432004
The poultry-associated microbiome: network analysis and farm-to-fork characterizations
BB Oakley, CA Morales, J Line, ME Berrang, RJ Meinersmann, ...
PloS one 8 (2), e57190, 2013
1352013
Influence of light and soil moisture on Sierran mixed-conifer understory communities
M North, B Oakley, R Fiegener, A Gray, M Barbour
Plant Ecology 177 (1), 13-24, 2005
1322005
Successional changes in the chicken cecal microbiome during 42 days of growth are independent of organic acid feed additives
BB Oakley, RJ Buhr, CW Ritz, BH Kiepper, ME Berrang, BS Seal, NA Cox
BMC veterinary research 10 (1), 1-8, 2014
1282014
Free-living and aggregate-associated Planctomycetes in the Black Sea
CA Fuchsman, JT Staley, BB Oakley, JB Kirkpatrick, JW Murray
FEMS microbiology ecology 80 (2), 402-416, 2012
1192012
Characterizing relationships among fecal indicator bacteria, microbial source tracking markers, and associated waterborne pathogen occurrence in stream water and sediments in a …
JK Bradshaw, BJ Snyder, A Oladeinde, D Spidle, ME Berrang, ...
Water research 101, 498-509, 2016
1162016
Vegetation and ecological characteristics of mixed-conifer and red fir forests at the Teakettle Experimental Forest
MP North
US Department of Agriculture, Forest Service, Pacific Southwest Research Station, 2002
1062002
Analysis of nitrite reductase (nirK and nirS) genes and cultivation reveal depauperate community of denitrifying bacteria in the Black Sea suboxic zone
BB Oakley, CA Francis, KJ Roberts, CA Fuchsman, S Srinivasan, ...
Environmental microbiology 9 (1), 118-130, 2007
1052007
Diversity and Distribution of Planctomycetes and Related Bacteria in the Suboxic Zone of the Black Sea
J Kirkpatrick, B Oakley, C Fuchsman, S Srinivasan, JT Staley, JW Murray
Applied and Environmental Microbiology 72 (4), 3079-3083, 2006
1002006
Evolutionary divergence and biogeography of sympatric niche-differentiated bacterial populations
BB Oakley, F Carbonero, CJ Van Der Gast, RJ Hawkins, KJ Purdy
The ISME Journal 4 (4), 488-497, 2010
692010
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