| Challenges and recommendations to improve the installability and archival stability of omics computational tools S Mangul, T Mosqueiro, RJ Abdill, D Duong, K Mitchell, V Sarwal, B Hill, ... PLoS biology 17 (6), e3000333, 2019 | 72 | 2019 |
| Joint cell segmentation and cell type annotation for spatial transcriptomics R Littman, Z Hemminger, R Foreman, D Arneson, G Zhang, ... Molecular systems biology 17 (6), e10108, 2021 | 46 | 2021 |
| Benchmarking of computational error-correction methods for next-generation sequencing data K Mitchell, JJ Brito, I Mandric, Q Wu, S Knyazev, S Chang, LS Martin, ... Genome biology 21, 1-13, 2020 | 42 | 2020 |
| Single‐cell transcriptomic profiling of satellite glial cells in stellate ganglia reveals developmental and functional axial dynamics VYH van Weperen, RJ Littman, DV Arneson, J Contreras, X Yang, ... Glia 69 (5), 1281-1291, 2021 | 18 | 2021 |
| A comprehensive analysis of the usability and archival stability of omics computational tools and resources S Mangul, T Mosqueiro, D Duong, K Mitchell, V Sarwal, B Hill, J Brito, ... bioRxiv, 452532, 2018 | 15 | 2018 |
| A comprehensive benchmarking of WGS-based deletion structural variant callers V Sarwal, S Niehus, R Ayyala, M Kim, A Sarkar, S Chang, A Lu, ... Briefings in bioinformatics 23 (4), bbac221, 2022 | 10 | 2022 |
| Therapeutic IDOL reduction ameliorates amyloidosis and improves cognitive function in APP/PS1 mice J Gao, R Littman, G Diamante, X Xiao, IS Ahn, X Yang, TA Cole, ... Molecular and Cellular Biology 40 (8), e00518-19, 2020 | 8 | 2020 |
| JSTA: joint cell segmentation and cell type annotation for spatial transcriptomics R Littman, Z Hemminger, R Foreman, D Arneson, G Zhang, ... bioRxiv, 2020.09. 18.304147, 2020 | 5 | 2020 |
| A comprehensive benchmarking of WGS-based structural variant callers V Sarwal, S Niehus, R Ayyala, S Chang, A Lu, N Darci-Maher, R Littman, ... Biorxiv, 2020.04. 16.045120, 2020 | 4 | 2020 |
| SCING: Inference of robust, interpretable gene regulatory networks from single cell and spatial transcriptomics R Littman, M Cheng, N Wang, C Peng, X Yang Iscience 26 (7), 2023 | 2 | 2023 |
| Tiered sympathetic control of cardiac function revealed by viral tracing and single cell transcriptome profiling S Sharma, R Littman, JD Tompkins, D Arneson, J Contreras, AH Dajani, ... Elife 12, e86295, 2023 | 2 | 2023 |
| Single‐cell RNA Sequencing reveals molecular heterogeneity of glia within mouse sympathetic ganglia VYSH van Weperen, J Contreras, R Littman, OA Ajijola The FASEB Journal 34 (S1), 1-1, 2020 | 2 | 2020 |
| SCING: Single Cell INtegrative Gene regulatory network inference elucidates robust, interpretable gene regulatory networks R Littman, N Wang, C Peng, X Yang bioRxiv, 2022.09. 07.506959, 2022 | 1 | 2022 |
| q-Diffusion leverages the full dimensionality of gene coexpression in single-cell transcriptomics MG Marmarelis, R Littman, F Battaglin, D Niedzwiecki, A Venook, ... Communications Biology 7 (1), 400, 2024 | | 2024 |
| Aging shifts the transcriptomic profile of satellite glial cells in murine nodose ganglia towards a pro-inflammatory phenotype V van Weperen, A Devarajan, R Littman, K Wang, K Shannon, X Yang, ... Physiology 38 (S1), 5727587, 2023 | | 2023 |
| Development and Application of Single Cell Multi-omics Methods for Complex Disease R Littman University of California, Los Angeles, 2022 | | 2022 |
| Josiah Brown Poster Abstract D Carrera, O Ajijola, RJ Littman, VYH van Weperen, DV Arneson, ... | | |
