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Diogo M. Camacho
Diogo M. Camacho
Vice President, Computational Biology @ Cellarity
Verified email at cellarity.com - Homepage
Title
Cited by
Cited by
Year
Wisdom of crowds for robust gene network inference
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature methods 9 (8), 796-804, 2012
18032012
Next-generation machine learning for biological networks
DM Camacho, KM Collins, RK Powers, JC Costello, JJ Collins
Cell 173 (7), 1581-1592, 2018
8412018
A complex human gut microbiome cultured in an anaerobic intestine-on-a-chip
S Jalili-Firoozinezhad, FS Gazzaniga, EL Calamari, DM Camacho, ...
Nature biomedical engineering 3 (7), 520-531, 2019
5972019
The Mycobacterium tuberculosis regulatory network and hypoxia
JE Galagan, K Minch, M Peterson, A Lyubetskaya, E Azizi, L Sweet, ...
Nature 499 (7457), 178-183, 2013
4652013
Antibiotic-Induced Bacterial Cell Death Exhibits Physiological and Biochemical Hallmarks of Apoptosis
DJ Dwyer, DM Camacho, MA Kohanski, JM Callura, JJ Collins
Molecular Cell, 2012
4032012
The origin of correlations in metabolomics data
D Camacho, A de la Fuente, P Mendes
Metabolomics 1 (1), 53-63, 2005
3102005
Fungicidal Drugs Induce a Common Oxidative-Damage Cellular Death Pathway
P Belenky, D Camacho, JJ Collins
Cell Reports, 2013
1882013
Directed differentiation of human induced pluripotent stem cells into mature kidney podocytes and establishment of a Glomerulus Chip
S Musah, N Dimitrakakis, DM Camacho, GM Church, DE Ingber
Nature protocols 13 (7), 1662-1685, 2018
1512018
Functional characterization of bacterial sRNAs using a network biology approach
SR Modi, DM Camacho, MA Kohanski, GC Walker, JJ Collins
Proceedings of the National Academy of Sciences 108 (37), 15522-15527, 2011
1182011
Species-specific enhancement of enterohemorrhagic E. coli pathogenesis mediated by microbiome metabolites
A Tovaglieri, A Sontheimer-Phelps, A Geirnaert, R Prantil-Baun, ...
Microbiome 7 (1), 1-21, 2019
1172019
Sequence-to-function deep learning frameworks for engineered riboregulators
JA Valeri, KM Collins, P Ramesh, MA Alcantar, BA Lepe, TK Lu, ...
Nature communications 11 (1), 5058, 2020
822020
Central role for RNase YbeY in Hfq-dependent and Hfq-independent small-RNA regulation in bacteria
SP Pandey, JA Winkler, H Li, DM Camacho, JJ Collins, GC Walker
BMC genomics 15, 1-16, 2014
672014
Comparison of Reverse‐Engineering Methods Using an in Silico Network
D CAMACHO, P VERA LICONA, P MENDES, R LAUBENBACHER
Annals of the New York Academy of Sciences 1115 (1), 73-89, 2007
582007
Deep-Learning Resources for Studying Glycan-Mediated Host-Microbe Interactions
D Bojar, RK Powers, DM Camacho, JJ Collins
Cell Host & Microbe 29 (1), 132-144. e3, 2021
56*2021
A systems biology study of two distinct growth phases of Saccharomyces cerevisiae cultures
AM Martins, D Camacho, J Shuman, W Sha, P Mendes, V Shulaev
Current Genomics 5 (8), 649-663, 2004
512004
Modelling and simulation for metabolomics data analysis
P Mendes, D Camacho, A de la Fuente
Biochemical Society Transactions 33 (6), 1427-1429, 2005
472005
Systems biology strikes gold
DM Camacho, JJ Collins
Cell 137 (1), 24-26, 2009
352009
Harnessing colon chip technology to identify commensal bacteria that promote host tolerance to infection
FS Gazzaniga, DM Camacho, M Wu, MF Silva Palazzo, ALM Dinis, ...
Frontiers in Cellular and Infection Microbiology 11, 638014, 2021
292021
Nutritional deficiency in an intestine-on-a-chip recapitulates injury hallmarks associated with environmental enteric dysfunction
A Bein, CW Fadel, B Swenor, W Cao, RK Powers, DM Camacho, ...
Nature Biomedical Engineering 6 (11), 1236-1247, 2022
23*2022
BioAutoMATED: An end-to-end automated machine learning tool for explanation and design of biological sequences
JA Valeri, LR Soenksen, KM Collins, P Ramesh, G Cai, R Powers, ...
Cell Systems 14 (6), 525-542. e9, 2023
82023
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