| PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability JC Kirby, P Speltz, LV Rasmussen, M Basford, O Gottesman, PL Peissig, ... Journal of the American Medical Informatics Association 23 (6), 1046-1052, 2016 | 312 | 2016 |
| The power of genetic diversity in genome-wide association studies of lipids SE Graham, SL Clarke, KHH Wu, S Kanoni, GJM Zajac, S Ramdas, ... Nature 600 (7890), 675-679, 2021 | 167 | 2021 |
| Desiderata for computable representations of electronic health records-driven phenotype algorithms H Mo, WK Thompson, LV Rasmussen, JA Pacheco, G Jiang, R Kiefer, ... Journal of the American Medical Informatics Association 22 (6), 1220-1230, 2015 | 131 | 2015 |
| Large-scale evaluation of automated clinical note de-identification and its impact on information extraction L Deleger, K Molnar, G Savova, F Xia, T Lingren, Q Li, K Marsolo, A Jegga, ... Journal of the American Medical Informatics Association 20 (1), 84-94, 2013 | 107 | 2013 |
| GWAS and enrichment analyses of non-alcoholic fatty liver disease identify new trait-associated genes and pathways across eMERGE Network B Namjou, T Lingren, Y Huang, S Parameswaran, BL Cobb, IB Stanaway, ... BMC medicine 17, 1-19, 2019 | 104 | 2019 |
| Web 2.0-based crowdsourcing for high-quality gold standard development in clinical natural language processing H Zhai, T Lingren, L Deleger, Q Li, M Kaiser, L Stoutenborough, I Solti Journal of medical Internet research 15 (4), e2426, 2013 | 102 | 2013 |
| Building gold standard corpora for medical natural language processing tasks L Deleger, Q Li, T Lingren, M Kaiser, K Molnar, L Stoutenborough, ... AMIA Annual Symposium Proceedings 2012, 144, 2012 | 99 | 2012 |
| Increasing the efficiency of trial-patient matching: automated clinical trial eligibility pre-screening for pediatric oncology patients Y Ni, J Wright, J Perentesis, T Lingren, L Deleger, M Kaiser, I Kohane, ... BMC medical informatics and decision making 15, 1-10, 2015 | 95 | 2015 |
| Automated clinical trial eligibility prescreening: increasing the efficiency of patient identification for clinical trials in the emergency department Y Ni, S Kennebeck, JW Dexheimer, CM McAneney, H Tang, T Lingren, ... Journal of the American Medical Informatics Association 22 (1), 166-178, 2015 | 90 | 2015 |
| Harmonizing clinical sequencing and interpretation for the eMERGE III network H Zouk, E Venner, NJ Lennon, DM Muzny, D Abrams, S Adunyah, ... The American Journal of Human Genetics 105 (3), 588-605, 2019 | 86 | 2019 |
| Developing and evaluating a machine learning based algorithm to predict the need of pediatric intensive care unit transfer for newly hospitalized children H Zhai, P Brady, Q Li, T Lingren, Y Ni, DS Wheeler, I Solti Resuscitation 85 (8), 1065-1071, 2014 | 86 | 2014 |
| Identification of four novel loci in asthma in European American and African American populations B Almoguera, L Vazquez, F Mentch, J Connolly, JA Pacheco, ... American journal of respiratory and critical care medicine 195 (4), 456-463, 2017 | 85 | 2017 |
| Phenome-wide association study (PheWAS) in EMR-linked pediatric cohorts, genetically links PLCL1 to speech language development and IL5-IL13 to … B Namjou, K Marsolo, RJ Caroll, JC Denny, MD Ritchie, SS Verma, ... Frontiers in genetics 5, 401, 2014 | 85 | 2014 |
| Evaluating the impact of pre-annotation on annotation speed and potential bias: natural language processing gold standard development for clinical named entity recognition in … T Lingren, L Deleger, K Molnar, H Zhai, J Meinzen-Derr, M Kaiser, ... Journal of the American Medical Informatics Association 21 (3), 406-413, 2014 | 82 | 2014 |
| Electronic health record based algorithm to identify patients with autism spectrum disorder T Lingren, P Chen, J Bochenek, F Doshi-Velez, P Manning-Courtney, ... PloS one 11 (7), e0159621, 2016 | 67 | 2016 |
| EMR-linked GWAS study: investigation of variation landscape of loci for body mass index in children B Namjou, M Keddache, K Marsolo, M Wagner, T Lingren, B Cobb, ... Frontiers in genetics 4, 268, 2013 | 59 | 2013 |
| Decentralized and reproducible geocoding and characterization of community and environmental exposures for multisite studies C Brokamp, C Wolfe, T Lingren, J Harley, P Ryan Journal of the American Medical Informatics Association 25 (3), 309-314, 2018 | 56 | 2018 |
| Phenotyping for patient safety: algorithm development for electronic health record based automated adverse event and medical error detection in neonatal intensive care Q Li, K Melton, T Lingren, ES Kirkendall, E Hall, H Zhai, Y Ni, M Kaiser, ... Journal of the American Medical Informatics Association 21 (5), 776-784, 2014 | 55 | 2014 |
| Facilitating phenotype transfer using a common data model G Hripcsak, N Shang, PL Peissig, LV Rasmussen, C Liu, B Benoit, ... Journal of biomedical informatics 96, 103253, 2019 | 51 | 2019 |
| Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research L Deleger, T Lingren, Y Ni, M Kaiser, L Stoutenborough, K Marsolo, ... Journal of biomedical informatics 50, 173-183, 2014 | 50 | 2014 |
Qi LiAssistant Professor, School of Business, SUNY New PaltzVerified email at newpaltz.edu
