| NAGphormer: A tokenized graph transformer for node classification in large graphs J Chen, K Gao, G Li, K He International Conference on Learning Representations (ICLR 2022), 2022 | 62 | 2022 |
| Biot5: Enriching cross-modal integration in biology with chemical knowledge and natural language associations Q Pei, W Zhang, J Zhu, K Wu, K Gao, L Wu, Y Xia, R Yan arXiv preprint arXiv:2310.07276, 2023 | 15 | 2023 |
| Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design K Gao, L Wu, J Zhu, T Peng, Y Xia, L He, S Xie, T Qin, H Liu, K He, TY Liu Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and …, 2023 | 8* | 2023 |
| FABind: Fast and accurate protein-ligand binding Q Pei, K Gao, L Wu, J Zhu, Y Xia, S Xie, T Qin, K He, TY Liu, R Yan Advances in Neural Information Processing Systems 36, 2024 | 4 | 2024 |
| BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning Q Pei, L Wu, K Gao, X Liang, Y Fang, J Zhu, S Xie, T Qin, R Yan arXiv preprint arXiv:2402.17810, 2024 | 2 | 2024 |
| Examining user-friendly and open-sourced large gpt models: A survey on language, multimodal, and scientific gpt models K Gao, S He, Z He, J Lin, QZ Pei, J Shao, W Zhang arXiv preprint arXiv:2308.14149, 2023 | 2 | 2023 |
| Tokenized Graph Transformer with Neighborhood Augmentation for Node Classification in Large Graphs J Chen, C Liu, K Gao, G Li, K He arXiv preprint arXiv:2305.12677, 2023 | 1 | 2023 |
| Revisiting language encoding in learning multilingual representations S Luo, K Gao, S Zheng, G Ke, D He, L Wang, TY Liu arXiv preprint arXiv:2102.08357, 2021 | 1 | 2021 |
| FABind+: Enhancing Molecular Docking through Improved Pocket Prediction and Pose Generation K Gao, Q Pei, J Zhu, T Qin, K He, TY Liu, L Wu arXiv preprint arXiv:2403.20261, 2024 | | 2024 |
| Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey Q Pei, L Wu, K Gao, J Zhu, Y Wang, Z Wang, T Qin, R Yan arXiv preprint arXiv:2403.01528, 2024 | | 2024 |
