Parameter estimation using Simulated Annealing for S-system models of biochemical networks OR Gonzalez, C Küper, K Jung, PC Naval Jr, E Mendoza Bioinformatics 23 (4), 480-486, 2007 | 191 | 2007 |

Reconstruction, modeling & analysis of Halobacterium salinarum R-1 metabolism O Gonzalez, S Gronau, M Falb, F Pfeiffer, E Mendoza, R Zimmer, ... Molecular BioSystems 4 (2), 148-159, 2008 | 94 | 2008 |

Modelling biological rhythms T Roenneberg, EJ Chua, R Bernardo, E Mendoza Current Biology 18 (17), R826-R835, 2008 | 77 | 2008 |

Cohomology of PGL_2 over imaginary quadratic integers E Mendoza Universität Bonn, 1980 | 66 | 1980 |

Predictive modeling of non‐viral gene transfer G Schwake, S Youssef, JT Kuhr, S Gude, MP David, E Mendoza, E Frey, ... Biotechnology and bioengineering 105 (4), 805-813, 2010 | 65 | 2010 |

Chemical reaction network approaches to biochemical systems theory CPP Arceo, EC Jose, A Marin-Sanguino, ER Mendoza Mathematical biosciences 269, 135-152, 2015 | 48 | 2015 |

Systems Analysis of Bioenergetics and Growth of the Extreme Halophile *Halobacterium salinarum*O Gonzalez, S Gronau, F Pfeiffer, E Mendoza, R Zimmer, D Oesterhelt PLoS computational biology 5 (4), e1000332, 2009 | 46 | 2009 |

Reaction networks and kinetics of biochemical systems CPP Arceo, EC Jose, AR Lao, ER Mendoza Mathematical biosciences 283, 13-29, 2017 | 36 | 2017 |

Challenges in lin-log modelling of glycolysis in Lactococcus lactis RCH Del Rosario, E Mendoza, EO Voit IET Systems Biology 2 (3), 136-149, 2008 | 36 | 2008 |

How many trimers? Modeling influenza virus fusion yields a minimum aggregate size of six trimers, three of which are fusogenic MP Dobay, A Dobay, J Bantang, E Mendoza Molecular BioSystems 7 (10), 2741-2749, 2011 | 32 | 2011 |

Cell type determines the light-induced endosomal escape kinetics of multifunctional mesoporous silica nanoparticles MP Dobay, A Schmidt, E Mendoza, T Bein, JO Rädler Nano letters 13 (3), 1047-1052, 2013 | 30 | 2013 |

Characterization of Growth and Metabolism of the Haloalkaliphile *Natronomonas pharaonis*O Gonzalez, T Oberwinkler, L Mansueto, F Pfeiffer, E Mendoza, R Zimmer, ... PLoS computational biology 6 (6), e1000799, 2010 | 30 | 2010 |

A deficiency zero theorem for a class of power-law kinetic systems with non-reactant-determined interactions N Fortun, A Lao, L Razon, E Mendoza MATCH Commun. Math. Comput. Chem 81 (3), 621-638, 2019 | 28 | 2019 |

Systems biology in psychiatric research: From high-throughput data to mathematical modeling F Tretter, G Winterer, PJ Gebicke-Haerter, ER Mendoza John Wiley & Sons, 2010 | 28 | 2010 |

Positive equilibria of a class of power-law kinetics DASJ Talabis, CPP Arceo, ER Mendoza Journal of Mathematical Chemistry 56 (2), 358-394, 2018 | 23 | 2018 |

Modeling nanoparticle uptake and intracellular distribution using stochastic process algebras MPD Dobay, AP Alberola, ER Mendoza, JO Rädler Journal of Nanoparticle Research 14 (4), 1-12, 2012 | 20 | 2012 |

Linear conjugacy of chemical kinetic systems AL Nazareno, RPL Eclarin, ER Mendoza, AR Lao arXiv preprint arXiv:1909.00533, 2019 | 16 | 2019 |

Reactant subspaces and kinetics of chemical reaction networks CPP Arceo, EC Jose, AR Lao, ER Mendoza Journal of Mathematical Chemistry 56 (2), 395-422, 2018 | 16 | 2018 |

Shift work research in the Philippines: current state and future directions JP Lozano-Kühne, MER Aguila, GF Manalang Jr, RB Chua, RS Gabud, ... Philippine Science Letters 5 (1), 17-29, 2012 | 16 | 2012 |

A deficiency-one algorithm for power-law kinetic systems with reactant-determined interactions NT Fortun, ER Mendoza, LF Razon, AR Lao Journal of Mathematical Chemistry 56 (10), 2929-2962, 2018 | 15 | 2018 |