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Siewert J. Marrink
Siewert J. Marrink
Professor of Molecular Dynamics, University of Groningen
Verified email at rug.nl - Homepage
Title
Cited by
Cited by
Year
The MARTINI force field: coarse grained model for biomolecular simulations
SJ Marrink, HJ Risselada, S Yefimov, DP Tieleman, AH De Vries
The Journal of Physical Chemistry B 111 (27), 7812-7824, 2007
58332007
The MARTINI coarse-grained force field: extension to proteins
L Monticelli, SK Kandasamy, X Periole, RG Larson, DP Tieleman, ...
Journal of Chemical Theory and Computation 4 (5), 819-834, 2008
26982008
Coarse grained model for semiquantitative lipid simulations
SJ Marrink, AH De Vries, AE Mark
The Journal of Physical Chemistry B 108 (2), 750-760, 2004
25642004
Improved parameters for the MARTINI coarse-grained protein force field
DH de Jong, G Singh, WFD Bennett, C Arnarez, TA Wassenaar, ...
Journal of Chemical Theory and Computation 9 (1), 687-697, 2013
13612013
Perspective on the MARTINI model
SJ Marrink, DP Tieleman
Chemical Society Reviews 42 (16), 6801-6822, 2013
12362013
A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems
DP Tieleman, SJ Marrink, HJC Berendsen
Biochimica et Biophysica Acta (BBA)-Reviews on Biomembranes 1331 (3), 235-270, 1997
10131997
Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations
TA Wassenaar, HI Ingólfsson, RA Bockmann, DP Tieleman, SJ Marrink
Journal of chemical theory and computation 11 (5), 2144-2155, 2015
9812015
Simulation of water transport through a lipid membrane
SJ Marrink, HJC Berendsen
The Journal of Physical Chemistry 98 (15), 4155-4168, 1994
9651994
Polarizable water model for the coarse-grained MARTINI force field
SO Yesylevskyy, LV Schäfer, D Sengupta, SJ Marrink
PLoS computational biology 6 (6), e1000810, 2010
9272010
Lipid organization of the plasma membrane
HI Ingólfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ...
Journal of the American Chemical Society 136 (41), 14554-14559, 2014
8812014
Combining an elastic network with a coarse-grained molecular force field: structure, dynamics, and intermolecular recognition
X Periole, M Cavalli, SJ Marrink, MA Ceruso
Journal of chemical theory and computation 5 (9), 2531-2543, 2009
6942009
Martini 3: a general purpose force field for coarse-grained molecular dynamics
PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ...
Nature Methods 18, 382–388, 2021
6902021
Going backward: A flexible geometric approach to reverse transformation from coarse grained to atomistic models
TA Wassenaar, K Pluhackova, RA Böckmann, SJ Marrink, DP Tieleman
Journal of Chemical Theory and Computation 10, 676-690, 2014
6652014
Toroidal pores formed by antimicrobial peptides show significant disorder
D Sengupta, H Leontiadou, AE Mark, SJ Marrink
Biochimica et Biophysica Acta (BBA)-Biomembranes 1778 (10), 2308-2317, 2008
6572008
The molecular face of lipid rafts in model membranes
HJ Risselada, SJ Marrink
Proceedings of the National Academy of Sciences 105 (45), 17367-17372, 2008
6412008
The power of coarse graining in biomolecular simulations
HI Ingólfsson, CA Lopez, JJ Uusitalo, DH Jong, SM Gopal, X Periole, ...
Wiley Interdisciplinary Reviews: Computational Molecular Science 4 (3), 225–248, 2014
6052014
Computational Modeling of Realistic Cell Membranes
SJ Marrink, V Corradi, PCT Souza, HI Ingólfsson, DP Tieleman, ...
Chemical Reviews 119 (9), 6184–6226, 2019
5902019
Antimicrobial peptides in action
H Leontiadou, AE Mark, SJ Marrink
Journal of the American Chemical Society 128 (37), 12156-12161, 2006
5542006
Simulation of pore formation in lipid bilayers by mechanical stress and electric fields
DP Tieleman, H Leontiadou, AE Mark, SJ Marrink
Journal of the American Chemical Society 125 (21), 6382-6383, 2003
5472003
Permeation process of small molecules across lipid membranes studied by molecular dynamics simulations
SJ Marrink, HJC Berendsen
The Journal of Physical Chemistry 100 (41), 16729-16738, 1996
5301996
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