Desiderata for computable representations of electronic health records-driven phenotype algorithms H Mo, WK Thompson, LV Rasmussen, JA Pacheco, G Jiang, R Kiefer, ... Journal of the American Medical Informatics Association 22 (6), 1220-1230, 2015 | 149 | 2015 |
Increasing the efficiency of trial-patient matching: automated clinical trial eligibility pre-screening for pediatric oncology patients Y Ni, J Wright, J Perentesis, T Lingren, L Deleger, M Kaiser, I Kohane, ... BMC medical informatics and decision making 15, 1-10, 2015 | 118 | 2015 |
Automatic chord estimation from audio: A review of the state of the art M McVicar, R Santos-Rodríguez, Y Ni, T De Bie IEEE/ACM Transactions on Audio, Speech, and Language Processing 22 (2), 556-575, 2014 | 117 | 2014 |
Automated clinical trial eligibility prescreening: increasing the efficiency of patient identification for clinical trials in the emergency department Y Ni, S Kennebeck, JW Dexheimer, CM McAneney, H Tang, T Lingren, ... Journal of the American Medical Informatics Association 22 (1), 166-178, 2015 | 111 | 2015 |
Developing and evaluating a machine learning based algorithm to predict the need of pediatric intensive care unit transfer for newly hospitalized children H Zhai, P Brady, Q Li, T Lingren, Y Ni, DS Wheeler, I Solti Resuscitation 85 (8), 1065-1071, 2014 | 101 | 2014 |
An end-to-end machine learning system for harmonic analysis of music Y Ni, M McVicar, R Santos-Rodriguez, T De Bie IEEE Transactions on Audio, Speech, and Language Processing 20 (6), 1771-1783, 2012 | 100 | 2012 |
Kernel regression for fMRI pattern prediction C Chu, Y Ni, G Tan, CJ Saunders, J Ashburner NeuroImage 56 (2), 662-673, 2011 | 98 | 2011 |
Harmonizing clinical sequencing and interpretation for the eMERGE III network H Zouk, E Venner, NJ Lennon, DM Muzny, D Abrams, S Adunyah, ... The American Journal of Human Genetics 105 (3), 588-605, 2019 | 97 | 2019 |
Electronic health record based algorithm to identify patients with autism spectrum disorder T Lingren, P Chen, J Bochenek, F Doshi-Velez, P Manning-Courtney, ... PloS one 11 (7), e0159621, 2016 | 85 | 2016 |
Hit song science once again a science Y Ni, R Santos-Rodriguez, M Mcvicar, T De Bie 4th International Workshop on Machine Learning and Music, 2011 | 83 | 2011 |
DeepImmuno: deep learning-empowered prediction and generation of immunogenic peptides for T-cell immunity G Li, B Iyer, VBS Prasath, Y Ni, N Salomonis Briefings in bioinformatics 22 (6), bbab160, 2021 | 81 | 2021 |
Phenotyping for patient safety: algorithm development for electronic health record based automated adverse event and medical error detection in neonatal intensive care Q Li, K Melton, T Lingren, ES Kirkendall, E Hall, H Zhai, Y Ni, M Kaiser, ... Journal of the American Medical Informatics Association 21 (5), 776-784, 2014 | 61 | 2014 |
Understanding effects of subjectivity in measuring chord estimation accuracy Y Ni, M McVicar, R Santos-Rodriguez, T De Bie IEEE Transactions on Audio, Speech, and Language Processing 21 (12), 2607-2615, 2013 | 60 | 2013 |
An end-to-end hybrid algorithm for automated medication discrepancy detection Q Li, SA Spooner, M Kaiser, N Lingren, J Robbins, T Lingren, H Tang, ... BMC medical informatics and decision making 15, 1-12, 2015 | 57 | 2015 |
Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research L Deleger, T Lingren, Y Ni, M Kaiser, L Stoutenborough, K Marsolo, ... Journal of biomedical informatics 50, 173-183, 2014 | 56 | 2014 |
Developing an algorithm to detect early childhood obesity in two tertiary pediatric medical centers T Lingren, V Thaker, C Brady, B Namjou, S Kennebeck, J Bickel, ... Applied clinical informatics 7 (03), 693-706, 2016 | 52 | 2016 |
A real-time automated patient screening system for clinical trials eligibility in an emergency department: design and evaluation Y Ni, M Bermudez, S Kennebeck, S Liddy-Hicks, J Dexheimer JMIR medical informatics 7 (3), e14185, 2019 | 45 | 2019 |
Finding warning markers: leveraging natural language processing and machine learning technologies to detect risk of school violence Y Ni, D Barzman, A Bachtel, M Griffey, A Osborn, M Sorter International journal of medical informatics 139, 104137, 2020 | 40 | 2020 |
Designing and evaluating an automated system for real-time medication administration error detection in a neonatal intensive care unit Y Ni, T Lingren, ES Hall, M Leonard, K Melton, ES Kirkendall Journal of the American Medical Informatics Association 25 (5), 555-563, 2018 | 39 | 2018 |
Automated detection of medication administration errors in neonatal intensive care Q Li, ES Kirkendall, ES Hall, Y Ni, T Lingren, M Kaiser, N Lingren, H Zhai, ... Journal of biomedical informatics 57, 124-133, 2015 | 39 | 2015 |