Hui-Hsien Chou
Hui-Hsien Chou
Complex Computation LLC
Verified email at - Homepage
Cited by
Cited by
A whole-genome assembly of Drosophila
EW Myers, GG Sutton, AL Delcher, IM Dew, DP Fasulo, MJ Flanigan, ...
Science 287 (5461), 2196-2204, 2000
DNA sequence quality trimming and vector removal
HH Chou, MH Holmes
Bioinformatics 17 (12), 1093-1104, 2001
Simple systems that exhibit self-directed replication
JA Reggia, SL Armentrout, HH Chou, Y Peng
Science 259 (5099), 1282-1287, 1993
Lucy2: an interactive DNA sequence quality trimming and vector removal tool
S Li, HH Chou
Bioinformatics 20 (16), 2865-2866, 2004
Emergence of self-replicating structures in a cellular automata space
HH Chou, JA Reggia
Physica D: Nonlinear Phenomena 110 (3-4), 252-276, 1997
Picky: oligo microarray design for large genomes
HH Chou, AP Hsia, DL Mooney, PS Schnable
Bioinformatics 20 (17), 2893-2902, 2004
Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy
KH Jung, C Dardick, LE Bartley, P Cao, J Phetsom, P Canlas, YS Seo, ...
PLoS One 3 (10), e3337, 2008
Problem solving during artificial selection of self-replicating loops
HH Chou, JA Reggia
Physica D: Nonlinear Phenomena 115 (3-4), 293-312, 1998
Nearly Identical Paralogs: Implications for Maize (Zea mays L.) Genome Evolution
SJ Emrich, L Li, TJ Wen, MD Yandeau-Nelson, Y Fu, L Guo, HH Chou, ...
Genetics 175 (1), 429-439, 2007
A two-genome microarray for the rice pathogens Xanthomonas oryzae pv. oryzae and X. oryzae pv. oryzicola and its use in the discovery of a difference in their regulation of …
YS Seo, M Sriariyanun, L Wang, J Pfeiff, J Phetsom, Y Lin, KH Jung, ...
BMC microbiology 8, 1-12, 2008
Self-replicating structures: evolution, emergence, and computation
JA Reggia, JD Lohn, HH Chou
Artificial Life 4 (3), 283-302, 1998
Cellular automata models of self-replicating systems
JA Reggia, HH Chou, JD Lohn
Advances in computers 47, 141-183, 1998
Combinatorial RNA interference therapy prevents selection of pre-existing HBV variants in human liver chimeric mice
YM Shih, CP Sun, HH Chou, TH Wu, CC Chen, PY Wu, YC Enya Chen, ...
Scientific reports 5 (1), 15259, 2015
Shared probe design and existing microarray reanalysis using PICKY
HH Chou
BMC bioinformatics 11, 1-14, 2010
The Trend cellular automata programming environment
HH Chou, W Huang, JA Reggia
Simulation 78 (2), 59-75, 2002
Efficient combination of multiple word models for improved sequence comparison
X Huang, L Ye, HH Chou, IH Yang, KM Chao
Bioinformatics 20 (16), 2529-2533, 2004
An extended cellular space method for simulating autocatalytic oligonucleotides
HH Chou, JA Reggia, R Navarro-Gonzalez, J Wu
Computers & chemistry 18 (1), 33-43, 1994
Rational design of high-number dsDNA fragments based on thermodynamics for the construction of full-length genes in a single reaction
BS Birla, HH Chou
PLoS One 10 (12), e0145682, 2015
Whole-genome thermodynamic analysis reduces siRNA off-target effects
X Chen, P Liu, HH Chou
PLoS One 8 (3), e58326, 2013
Thermodynamically optimal whole-genome tiling microarray design and validation
H Cho, HH Chou
BMC Research Notes 9, 1-12, 2016
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