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Fen Pei
Fen Pei
Machine Learning Scientist, TandemAI
Verified email at tandemai.com
Title
Cited by
Cited by
Year
Synthesis of site‐specifically phosphate‐caged siRNAs and evaluation of their RNAi activity and stability
L Wu, F Pei, J Zhang, J Wu, M Feng, Y Wang, H Jin, L Zhang, X Tang
Chemistry–A European Journal 20 (38), 12114-12122, 2014
332014
Identifying glyceraldehyde 3-phosphate dehydrogenase as a cyclic adenosine diphosphoribose binding protein by photoaffinity protein–ligand labeling approach
K Zhang, W Sun, L Huang, K Zhu, F Pei, L Zhu, Q Wang, Y Lu, H Zhang, ...
Journal of the American Chemical Society 139 (1), 156-170, 2017
292017
Predicting the structural basis of targeted protein degradation by integrating molecular dynamics simulations with structural mass spectrometry
T Dixon, D MacPherson, B Mostofian, T Dauzhenka, S Lotz, D McGee, ...
Nature communications 13 (1), 5884, 2022
272022
Mechanisms of action of autophagy modulators dissected by quantitative systems pharmacology analysis
Q Shi, F Pei, GA Silverman, SC Pak, DH Perlmutter, B Liu, I Bahar
International journal of molecular sciences 21 (8), 2855, 2020
252020
QuartataWeb: integrated chemical–protein-pathway mapping for polypharmacology and chemogenomics
H Li, F Pei, DL Taylor, I Bahar
Bioinformatics 36 (12), 3935-3937, 2020
242020
A systems‐level study reveals host‐targeted repurposable drugs against SARS‐CoV‐2 infection
F Chen, Q Shi, F Pei, A Vogt, RA Porritt, G Garcia Jr, AC Gomez, ...
Molecular systems biology 17 (8), e10239, 2021
232021
Connecting neuronal cell protective pathways and drug combinations in a Huntington’s disease model through the application of quantitative systems pharmacology
F Pei, H Li, MJ Henderson, SA Titus, A Jadhav, A Simeonov, ...
Scientific Reports 7 (1), 17803, 2017
192017
Synthesis and biological evaluation of pyridinone analogues as novel potent HIV-1 NNRTIs
Y Cao, Y Zhang, S Wu, Q Yang, X Sun, J Zhao, F Pei, Y Guo, C Tian, ...
Bioorganic & Medicinal Chemistry 23 (1), 149-159, 2015
192015
Harnessing human microphysiology systems as key experimental models for quantitative systems pharmacology
DL Taylor, A Gough, ME Schurdak, L Vernetti, CS Chennubhotla, ...
Concepts and Principles of Pharmacology: 100 Years of the Handbook of …, 2019
172019
Quantitative systems pharmacological analysis of drugs of abuse reveals the pleiotropy of their targets and the effector role of mTORC1
F Pei, H Li, B Liu, I Bahar
Frontiers in Pharmacology 10, 435800, 2019
132019
Enrichment assessment of multiple virtual screening strategies for toll‐like receptor 8 agonists based on a maximal unbiased benchmarking data set
F Pei, H Jin, X Zhou, J Xia, L Sun, Z Liu, L Zhang
Chemical Biology & Drug Design 86 (5), 1226-1241, 2015
132015
Predicting protein–protein interactions using symmetric logistic matrix factorization
F Pei, Q Shi, H Zhang, I Bahar
Journal of chemical information and modeling 61 (4), 1670-1682, 2021
92021
Microenvironmental Effect of 2′-O-(1-Pyrenylmethyl)uridine Modified Fluorescent Oligonucleotide Probes on Sensitive and Selective Detection of Target RNA
G Imincan, F Pei, L Yu, H Jin, L Zhang, X Yang, L Zhang, XJ Tang
Analytical Chemistry 88 (8), 4448-4455, 2016
62016
A Quantitative Systems Pharmacology Platform Reveals NAFLD Pathophysiological States and Targeting Strategies
DE Lefever, MT Miedel, F Pei, JK DiStefano, R Debiasio, TY Shun, ...
Metabolites 12 (6), 528, 2022
52022
Automatic relationship verification in online medical knowledge base: a large scale study in SemMedDB
D Zhang, D He, N Zou, X Zhou, F Pei
2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018
32018
A quantitative systems pharmacology approach to infer pathways involved in complex disease phenotypes
ME Schurdak, F Pei, TR Lezon, D Carlisle, R Friedlander, DL Taylor, ...
Phenotypic Screening: Methods and Protocols, 207-222, 2018
32018
Coupled Mixed Model for Joint Genetic Analysis of Complex Disorders with Two Independently Collected Data Sets
H Wang, F Pei, MM Vanyukov, I Bahar, W Wu, EP Xing
22018
Coupled mixed model for joint genetic analysis of complex disorders with two independently collected data sets
H Wang, F Pei, MM Vanyukov, I Bahar, W Wu, EP Xing
BMC bioinformatics 22, 1-14, 2021
12021
Development and Applications of Quantitative Systems Pharmacology Methods and Tools for Drug Discovery
F Pei
University of Pittsburgh, 2020
2020
Investigation of the effect of 2'substitution of NMN analogues on CD38 NADase activity
J Li, F Pei, W Zhu, H Jin, Y Zhao, L Zhang, H Lee, L Zhang
J. Chin. Pharm. Sci. 24 (8), 514-523, 2015
2015
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Articles 1–20