Follow
Sanjit Singh Batra
Sanjit Singh Batra
UC Berkeley, Indian Institute of Technology, Baylor College of Medicine
Verified email at berkeley.edu - Homepage
Title
Cited by
Cited by
Year
De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds
O Dudchenko, SS Batra, AD Omer, SK Nyquist, M Hoeger, NC Durand, ...
Science 356 (6333), 92-95, 2017
14752017
Improved reference genome of Aedes aegypti informs arbovirus vector control
BJ Matthews, O Dudchenko, SB Kingan, S Koren, I Antoshechkin, ...
Nature 563 (7732), 501-507, 2018
4222018
The Juicebox Assembly Tools module facilitates de novo assembly of mammalian genomes with chromosome-length scaffolds for under $1000
O Dudchenko, MS Shamim, SS Batra, NC Durand, NT Musial, R Mostofa, ...
BioRxiv, 254797, 2018
2212018
Differences in the path to exit the ribosome across the three domains of life
K Dao Duc, SS Batra, N Bhattacharya, JHD Cate, YS Song
Nucleic acids research 47 (8), 4198-4210, 2019
892019
Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control
BJ Matthews, O Dudchenko, S Kingan, S Koren, I Antoshechkin, ...
BioRxiv, 240747, 2017
292017
The Juicebox Assembly Tools module facilitates de novo assembly of mammalian genomes with chromosome-length scaffolds for under $1000. BioRxiv, 254797
O Dudchenko, MS Shamim, SS Batra, NC Durand, NT Musial, R Mostofa, ...
Preprint, 2018
282018
Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data
SS Batra, M Levy-Sakin, J Robinson, J Guillory, S Durinck, TP Vilgalys, ...
Gigascience 9 (12), giaa134, 2020
202020
Sparse short-term time series forecasting models via minimum model complexity
P Gupta, SS Batra
Neurocomputing 243, 1-11, 2017
152017
Feature Selection for classification of hyperspectral data by minimizing a tight bound on the VC dimension
P Preet, SS Batra
arXiv preprint arXiv:1509.08112, 2015
152015
Learning a hyperplane regressor through a tight bound on the VC dimension
S Chandra, SS Batra, S Sabharwal
Neurocomputing 171, 1610-1616, 2016
122016
Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs
JV Bredeson, AB Mudd, S Medina-Ruiz, T Mitros, OK Smith, KE Miller, ...
Nature Communications 15 (1), 579, 2024
92024
DNA language models are powerful predictors of genome-wide variant effects
G Benegas, SS Batra, YS Song
Proceedings of the National Academy of Sciences 120 (44), e2311219120, 2023
82023
DNA language models are powerful zero-shot predictors of non-coding variant effects
G Benegas, SS Batra, YS Song
82022
The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles
J Schreiber, C Boix, J wook Lee, H Li, Y Guan, CC Chang, JC Chang, ...
Genome biology 24 (1), 79, 2023
72023
Hi-C yields chromosome-length scaffolds for a legume genome, Trifolium subterraneum
O Dudchenko, M Pham, C Lui, SS Batra, M Hoeger, SK Nyquist, ...
bioRxiv, 473553, 2018
72018
On a Linear Diophantine Problem Involving the Fibonacci and Lucas Sequences.
SS Batra, N Kumar, A Tripathi
Integers 15, A26, 2015
62015
Jayadeva. Feature Selection for classification of hyperspectral data by minimizing a tight bound on the VC dimension. arXiv 2015
P Preet, SS Batra
arXiv preprint arXiv:1509.08112, 0
4
Some problems concerning the Frobenius number for extensions of an arithmetic progression
SS Batra, N Kumar, A Tripathi
The Ramanujan Journal 48, 545-565, 2019
32019
Tracing cancer evolution and heterogeneity using Hi-C
DD Erdmann-Pham, SS Batra, TK Turkalo, J Durbin, M Blanchette, I Yeh, ...
Nature Communications 14 (1), 7111, 2023
22023
DNA language models are powerful zero-shot predictors of genome-wide variant effects
G Benegas, SS Batra, YS Song
bioRxiv, 2022.08. 22.504706, 2022
12022
The system can't perform the operation now. Try again later.
Articles 1–20