| De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds O Dudchenko, SS Batra, AD Omer, SK Nyquist, M Hoeger, NC Durand, ... Science 356 (6333), 92-95, 2017 | 1718 | 2017 |
| Improved reference genome of Aedes aegypti informs arbovirus vector control BJ Matthews, O Dudchenko, SB Kingan, S Koren, I Antoshechkin, ... Nature 563 (7732), 501-507, 2018 | 455 | 2018 |
| The Juicebox Assembly Tools module facilitates de novo assembly of mammalian genomes with chromosome-length scaffolds for under $1000 O Dudchenko, MS Shamim, SS Batra, NC Durand, NT Musial, R Mostofa, ... BioRxiv, 254797, 2018 | 243 | 2018 |
| Differences in the path to exit the ribosome across the three domains of life K Dao Duc, SS Batra, N Bhattacharya, JHD Cate, YS Song Nucleic acids research 47 (8), 4198-4210, 2019 | 93 | 2019 |
| The Juicebox Assembly Tools module facilitates de novo assembly of mammalian genomes with chromosome-length scaffolds for under $1000. BioRxiv, 254797 O Dudchenko, MS Shamim, SS Batra, NC Durand, NT Musial, R Mostofa, ... Preprint, 2018 | 33 | 2018 |
| Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control BJ Matthews, O Dudchenko, S Kingan, S Koren, I Antoshechkin, ... BioRxiv, 240747, 2017 | 31 | 2017 |
| DNA language models are powerful predictors of genome-wide variant effects G Benegas, SS Batra, YS Song Proceedings of the National Academy of Sciences 120 (44), e2311219120, 2023 | 30 | 2023 |
| Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data SS Batra, M Levy-Sakin, J Robinson, J Guillory, S Durinck, TP Vilgalys, ... Gigascience 9 (12), giaa134, 2020 | 23 | 2020 |
| Feature Selection for classification of hyperspectral data by minimizing a tight bound on the VC dimension P Preet, SS Batra arXiv preprint arXiv:1509.08112, 2015 | 15 | 2015 |
| DNA language models are powerful zero-shot predictors of non-coding variant effects G Benegas, SS Batra, YS Song BioRxiv, 2022-08, 2022 | 14 | 2022 |
| Sparse short-term time series forecasting models via minimum model complexity P Gupta, SS Batra Neurocomputing 243, 1-11, 2017 | 14 | 2017 |
| Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs JV Bredeson, AB Mudd, S Medina-Ruiz, T Mitros, OK Smith, KE Miller, ... Nature Communications 15 (1), 579, 2024 | 13 | 2024 |
| Learning a hyperplane regressor through a tight bound on the VC dimension S Chandra, SS Batra, S Sabharwal Neurocomputing 171, 1610-1616, 2016 | 11 | 2016 |
| The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles J Schreiber, C Boix, J wook Lee, H Li, Y Guan, CC Chang, JC Chang, ... Genome biology 24 (1), 79, 2023 | 9 | 2023 |
| Hi-C yields chromosome-length scaffolds for a legume genome, Trifolium subterraneum O Dudchenko, M Pham, C Lui, SS Batra, M Hoeger, SK Nyquist, ... bioRxiv, 473553, 2018 | 7 | 2018 |
| Tracing cancer evolution and heterogeneity using Hi-C DD Erdmann-Pham, SS Batra, TK Turkalo, J Durbin, M Blanchette, I Yeh, ... Nature Communications 14 (1), 7111, 2023 | 4 | 2023 |
| On a Linear Diophantine Problem Involving the Fibonacci and Lucas Sequences. SS Batra, N Kumar, A Tripathi Integers 15, A26, 2015 | 4 | 2015 |
| Jayadeva. Feature Selection for classification of hyperspectral data by minimizing a tight bound on the VC dimension. arXiv 2015 P Preet, SS Batra arXiv preprint arXiv:1509.08112, 0 | 4 | |
| Three-dimensional genome architecture persists in a 52,000-year-old woolly mammoth skin sample M Sandoval-Velasco, O Dudchenko, JA Rodríguez, CP Estrada, ... Cell 187 (14), 3541-3562. e51, 2024 | 1 | 2024 |
| XAIQA: Explainer-Based Data Augmentation for Extractive Question Answering J Stremmel, A Saeedi, H Hassanzadeh, S Batra, J Hertzberg, J Murillo, ... arXiv preprint arXiv:2312.03567, 2023 | 1 | 2023 |
Olga DudchenkoBaylor College of MedicineVerified email at bcm.edu
