CoeViz: a web-based tool for coevolution analysis of protein residues FN Baker, A Porollo BMC bioinformatics 17, 1-7, 2016 | 54 | 2016 |
Llasmol: Advancing large language models for chemistry with a large-scale, comprehensive, high-quality instruction tuning dataset B Yu, FN Baker, Z Chen, X Ning, H Sun arXiv preprint arXiv:2402.09391, 2024 | 31 | 2024 |
Coeviz: a web-based integrative platform for interactive visualization of large similarity and distance matrices FN Baker, A Porollo Data 3 (1), 4, 2018 | 8 | 2018 |
Scienceagentbench: Toward rigorous assessment of language agents for data-driven scientific discovery Z Chen, S Chen, Y Ning, Q Zhang, B Wang, B Yu, Y Li, Z Liao, C Wei, Z Lu, ... arXiv preprint arXiv:2410.05080, 2024 | 7 | 2024 |
Coeviz 2: protein graphs derived from amino acid covariance D Corcoran, N Maltbie, S Sudalairaj, FN Baker, J Hirschfeld, A Porollo Frontiers in bioinformatics 1, 653681, 2021 | 7 | 2021 |
A quantitative model to estimate drug resistance in pathogens FN Baker, MT Cushion, A Porollo Journal of Fungi 2 (4), 30, 2016 | 6 | 2016 |
RLSynC: Offline–Online Reinforcement Learning for Synthon Completion FN Baker, Z Chen, D Adu-Ampratwum, X Ning Journal of Chemical Information and Modeling 64 (17), 6723-6735, 2024 | 2 | 2024 |
Tooling or Not Tooling? The Impact of Tools on Language Agents for Chemistry Problem Solving B Yu, FN Baker, Z Chen, G Herb, B Gou, D Adu-Ampratwum, X Ning, ... arXiv preprint arXiv:2411.07228, 2024 | 1 | 2024 |
Mining and Visualization of Amino Acid Coevolution Data FN Baker University of Cincinnati, 2019 | | 2019 |
A covariance-based model to estimate antimicrobial drug resistance FN Baker, A Porollo PROTEIN SCIENCE 25, 100-101, 2016 | | 2016 |