Emily B. Hollister

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Patrick D. SchlossFrederick G Novy Collegiate Professor of Microbiology & Immunology, University of MichiganVerified email at umich.edu
Terry J. GentryProfessor of Soil & Aquatic Microbiology, Texas A&M UniversityVerified email at tamu.edu
J. L. CopeDirector of Microbial Innovation, PAHCVerified email at juliacope.com
Brian OakleyProfessor, College of Veterinary Medicine, Western University of Health Sciences, Pomona, CAVerified email at westernu.edu
Jason SahlAssociate Professor of Biology at Northern Arizona UniversityVerified email at nau.edu
Donovan ParksUniversity of QueenslandVerified email at uq.edu.au
Martin HartmannETH Zürich, Department of Environmental Systems Sciences, Institute of Agricultural SciencesVerified email at microbiome.ch
Blaz StresProfessor and Research Counsellor at National Institute of Chemistry, Uni_LJ, Inst. Jozef StefanVerified email at ki.si
Numan OezguenTexas Childrens Hospital, Baylor College of MedicineVerified email at bcm.edu
Heather H. WilkinsonProfessor and Associate Department Head, Plant Pathology and Microbiology, Texas A&M UniversityVerified email at tamu.edu
Frank HonsProfessor of Soil Science, Texas A&M UniversityVerified email at tamu.edu
Anil C SomenahallyAssistant Professor, Texas A&M AgriLife Research, Texas A&M UniversityVerified email at ag.tamu.edu
Nadim AjamiThe University of Texas MD Anderson Cancer CenterVerified email at mdanderson.org
Scot E DowdMolecular Research LP (MR DNA)Verified email at mrdnalab.com
Thomas BouttonTexas A&M UniversityVerified email at tamu.edu
Susannah TringeEnvironmental Genomics and Systems Biology, Lawrence Berkeley National LaboratoryVerified email at lbl.gov
Daniel EbboleTexas A&M UnviersityVerified email at tamu.edu
Sarah Highlander, PhDProfessor, Translational Genomics Research InstituteVerified email at tgen.org
Christel ChehoudPerelman School of Medicine, University of PennsylvaniaVerified email at upenn.edu
Christopher W. SchadtOak Ridge National Laboratory / University of TennesseeVerified email at ornl.gov

Emily B. Hollister

Director, R&D Computational Biology, Diversigen, Inc

Verified email at diversigen.com

Microbial Ecology Metagenomics Microbiome Human microbiome


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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ... Applied and environmental microbiology 75 (23), 7537-7541, 2009	20551	2009
Intestinal dysbiosis in preterm infants preceding necrotizing enterocolitis: a systematic review and meta-analysis M Pammi, J Cope, PI Tarr, BB Warner, AL Morrow, V Mai, KE Gregory, ... Microbiome 5, 1-15, 2017	583	2017
Compositional and functional features of the gastrointestinal microbiome and their effects on human health EB Hollister, C Gao, J Versalovic Gastroenterology 146 (6), 1449-1458, 2014	582	2014
A genomic catalog of Earth’s microbiomes Nature Biotechnology, 2020	562*	2020
Structure and function of the healthy pre-adolescent pediatric gut microbiome EB Hollister, K Riehle, RA Luna, EM Weidler, M Rubio-Gonzales, ... Microbiome 3, 1-13, 2015	416	2015
Randomised clinical trial: gut microbiome biomarkers are associated with clinical response to a low FODMAP diet in children with the irritable bowel syndrome BP Chumpitazi, JL Cope, EB Hollister, CM Tsai, AR McMeans, RA Luna, ... Alimentary pharmacology & therapeutics 42 (4), 418-427, 2015	402	2015
Shifts in microbial community structure along an ecological gradient of hypersaline soils and sediments EB Hollister, AS Engledow, AJM Hammett, TL Provin, HH Wilkinson, ... The ISME journal 4 (6), 829-838, 2010	373	2010
Role of the gut microbiome in obstructive sleep apnea–induced hypertension DJ Durgan, BP Ganesh, JL Cope, NJ Ajami, SC Phillips, JF Petrosino, ... Hypertension 67 (2), 469-474, 2016	319	2016
GABA‐producing Bifidobacterium dentium modulates visceral sensitivity in the intestine K Pokusaeva, C Johnson, B Luk, G Uribe, Y Fu, N Oezguen, ... Neurogastroenterology & Motility 29 (1), e12904, 2017	280	2017
Differences in gut microbial composition correlate with regional brain volumes in irritable bowel syndrome JS Labus, EB Hollister, J Jacobs, K Kirbach, N Oezguen, A Gupta, ... Microbiome 5, 1-17, 2017	262	2017
Black box chimera check (B2C2): a windows-based software for batch depletion of chimeras from bacterial 16S rRNA gene datasets V Gontcharova, E Youn, RD Wolcott, EB Hollister, TJ Gentry, SE Dowd The open microbiology journal 4, 47, 2010	205	2010
Effects of repeated glyphosate applications on soil microbial community composition and the mineralization of glyphosate SH Lancaster, EB Hollister, SA Senseman, TJ Gentry Pest Management Science: formerly Pesticide Science 66 (1), 59-64, 2010	163	2010
Leveraging sequence-based faecal microbial community survey data to identify a composite biomarker for colorectal cancer MS Shah, TZ DeSantis, T Weinmaier, PJ McMurdie, JL Cope, A Altrichter, ... Gut 67 (5), 882-891, 2018	162	2018
Gut microbiota influences low fermentable substrate diet efficacy in children with irritable bowel syndrome BP Chumpitazi, EB Hollister, N Oezguen, CM Tsai, AR McMeans, ... Gut microbes 5 (2), 165-175, 2014	158	2014
Water management impacts on arsenic speciation and iron-reducing bacteria in contrasting rice-rhizosphere compartments AC Somenahally, EB Hollister, W Yan, TJ Gentry, RH Loeppert Environmental science & technology 45 (19), 8328-8335, 2011	145	2011
The airway microbiome of intubated premature infants: characteristics and changes that predict the development of bronchopulmonary dysplasia P Lohmann, RA Luna, EB Hollister, S Devaraj, TA Mistretta, SE Welty, ... Pediatric research 76 (3), 294-301, 2014	144	2014
Human virome and disease: high-throughput sequencing for virus discovery, identification of phage-bacteria dysbiosis and development of therapeutic approaches with emphasis on … TM Santiago-Rodriguez, EB Hollister Viruses 11 (7), 656, 2019	140	2019
From Prediction to Function Using Evolutionary Genomics: Human-Specific Ecotypes of Lactobacillus reuteri Have Diverse Probiotic Functions JK Spinler, A Sontakke, EB Hollister, SF Venable, PL Oh, MA Balderas, ... Genome biology and evolution 6 (7), 1772-1789, 2014	119	2014
Airway microbiome and development of bronchopulmonary dysplasia in preterm infants: a systematic review M Pammi, CV Lal, BD Wagner, PM Mourani, P Lohmann, RA Luna, ... The Journal of pediatrics 204, 126-133. e2, 2019	108	2019
Transfer of viral communities between human individuals during fecal microbiota transplantation C Chehoud, A Dryga, Y Hwang, D Nagy-Szakal, EB Hollister, RA Luna, ... MBio 7 (2), 10.1128/mbio. 00322-16, 2016	108	2016

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