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Ying Kai
Ying Kai
Director of Bioinformatics
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Year
The B73 maize genome: complexity, diversity, and dynamics
PS Schnable, D Ware, RS Fulton, JC Stein, F Wei, S Pasternak, C Liang, ...
science 326 (5956), 1112-1115, 2009
45562009
The map-based sequence of the rice genome
P Khurana, K Gaikwad
Nature 436, 793-800, 2005
2542*2005
Sequence and analysis of rice chromosome 4
Q Feng, Y Zhang, P Hao, S Wang, G Fu, Y Huang, Y Li, J Zhu, Y Liu, X Hu, ...
Nature 420 (6913), 316-320, 2002
6982002
Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content
NM Springer, K Ying, Y Fu, T Ji, CT Yeh, Y Jia, W Wu, T Richmond, ...
PLoS genetics 5 (11), e1000734, 2009
5942009
Genome-wide patterns of genetic variation among elite maize inbred lines
J Lai, R Li, X Xu, W Jin, M Xu, H Zhao, Z Xiang, W Song, K Ying, M Zhang, ...
Nature genetics 42 (11), 1027-1030, 2010
5342010
Mu Transposon Insertion Sites and Meiotic Recombination Events Co-Localize with Epigenetic Marks for Open Chromatin across the Maize Genome
S Liu, CT Yeh, T Ji, K Ying, H Wu, HM Tang, Y Fu, D Nettleton, ...
PLoS genetics 5 (11), e1000733, 2009
2302009
B73-Mo17 near-isogenic lines demonstrate dispersed structural variation in maize
SR Eichten, JM Foerster, N de Leon, Y Kai, CT Yeh, S Liu, JA Jeddeloh, ...
Plant physiology 156 (4), 1679-1690, 2011
1062011
Mendelian and non-Mendelian regulation of gene expression in maize
L Li, K Petsch, R Shimizu, S Liu, WW Xu, K Ying, J Yu, MJ Scanlon, ...
PLoS genetics 9 (1), e1003202, 2013
1042013
Repeat subtraction‐mediated sequence capture from a complex genome
Y Fu, NM Springer, DJ Gerhardt, K Ying, CT Yeh, W Wu, ...
The Plant Journal 62 (5), 898-909, 2010
1022010
Copy number variation detection using next generation sequencing read counts
H Wang, D Nettleton, K Ying
BMC bioinformatics 15, 1-14, 2014
942014
A fine physical map of the rice chromosome 4
Q Zhao, Y Zhang, Z Cheng, M Chen, S Wang, Q Feng, Y Huang, Y Li, ...
Genome Research 12 (5), 817-823, 2002
902002
Microarray Analysis Reveals Similarities and Variations in Genetic Programs Controlling Pollination/Fertilization and Stress Responses in Rice (Oryza sativa L.)
L Lan, M Li, Y Lai, W Xu, Z Kong, K Ying, B Han, Y Xue
Plant molecular biology 59, 151-164, 2005
772005
A novel genomic alteration of LSAMP associates with aggressive prostate cancer in African American men
G Petrovics, H Li, T Stümpel, SH Tan, D Young, S Katta, Q Li, K Ying, ...
EBioMedicine 2 (12), 1957-1964, 2015
762015
A collection of 10,096 indica rice full-length cDNAs reveals highly expressed sequence divergence between Oryza sativa indica and japonica subspecies
X Liu, T Lu, S Yu, Y Li, Y Huang, T Huang, L Zhang, J Zhu, Q Zhao, D Fan, ...
Plant molecular biology 65, 403-415, 2007
662007
Detailed analysis of a contiguous 22-Mb region of the maize genome
F Wei, JC Stein, C Liang, J Zhang, RS Fulton, RS Baucom, E De Paoli, ...
PLoS genetics 5 (11), e1000728, 2009
542009
Sequence variations of simple sequence repeats on chromosome-4 in two subspecies of the Asian cultivated rice
C Li, Y Zhang, K Ying, X Liang, B Han
Theoretical and Applied Genetics 108, 392-400, 2004
512004
Preparation of single rice chromosome for construction of a DNA library using a laser microbeam trap
X Liu, H Wang, Y Li, Y Tang, Y Liu, X Hu, P Jia, K Ying, Q Feng, J Guan, ...
Journal of biotechnology 109 (3), 217-226, 2004
342004
Changes in genome content generated via segregation of non‐allelic homologs
S Liu, K Ying, CT Yeh, J Yang, R Swanson‐Wagner, W Wu, T Richmond, ...
The Plant Journal 72 (3), 390-399, 2012
292012
High-resolution genotyping via whole genome hybridizations to microarrays containing long oligonucleotide probes
Y Fu, NM Springer, K Ying, CT Yeh, AL Iniguez, T Richmond, W Wu, ...
PLoS One 5 (12), e14178, 2010
152010
Molecular profiling of radical prostatectomy tissue from patients with no sign of progression identifies ERG as the strongest independent predictor of recurrence
W Yan, M Jamal, SH Tan, Y Song, D Young, Y Chen, S Katta, K Ying, ...
Oncotarget 10 (60), 6466, 2019
142019
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