| Probalign: multiple sequence alignment using partition function posterior probabilities U Roshan, DR Livesay Bioinformatics 22 (22), 2715-2721, 2006 | 287 | 2006 |
| Conservation of electrostatic properties within enzyme families and superfamilies DR Livesay, P Jambeck, A Rojnuckarin, S Subramaniam Biochemistry 42 (12), 3464-3473, 2003 | 97 | 2003 |
| A flexible approach for understanding protein stability DR Livesay, S Dallakyan, GG Wood, DJ Jacobs FEBS letters 576 (3), 468-476, 2004 | 95 | 2004 |
| How accurate and statistically robust are catalytic site predictions based on closeness centrality? E Chea, DR Livesay Bmc Bioinformatics 8, 1-14, 2007 | 94 | 2007 |
| Predicting protein functional sites with phylogenetic motifs D La, B Sutch, DR Livesay Proteins: Structure, Function, and Bioinformatics 58 (2), 309-320, 2005 | 86 | 2005 |
| Protein dynamics CC David, DJ Jacobs, DR Livesay Methods in Molecular Biology 1084, 2014 | 71 | 2014 |
| Conserved quantitative stability/flexibility relationships (QSFR) in an orthologous RNase H pair DR Livesay, DJ Jacobs Proteins: Structure, Function, and Bioinformatics 62 (1), 130-143, 2006 | 71 | 2006 |
| Hydrogen bond networks determine emergent mechanical and thermodynamic properties across a protein family DR Livesay, DH Huynh, S Dallakyan, DJ Jacobs Chemistry Central Journal 2, 1-20, 2008 | 62 | 2008 |
| New insight into long‐range nonadditivity within protein double‐mutant cycles AY Istomin, MM Gromiha, OK Vorov, DJ Jacobs, DR Livesay Proteins: Structure, Function, and Bioinformatics 70 (3), 915-924, 2008 | 60 | 2008 |
| Optimized electrostatic surfaces parallel increased thermostability: a structural bioinformatic analysis E Alsop, M Silver, DR Livesay Protein Engineering 16 (12), 871-874, 2003 | 60 | 2003 |
| Bimolecular reaction simulation using Weighted Ensemble Brownian dynamics and the University of Houston Brownian Dynamics program A Rojnuckarin, DR Livesay, S Subramaniam Biophysical journal 79 (2), 686-693, 2000 | 58 | 2000 |
| Conferring thermostability to mesophilic proteins through optimized electrostatic surfaces M Torrez, M Schultehenrich, DR Livesay Biophysical journal 85 (5), 2845-2853, 2003 | 57 | 2003 |
| Changes in lysozyme flexibility upon mutation are frequent, large and long-ranged D Verma, DJ Jacobs, DR Livesay PLoS computational biology 8 (3), e1002409, 2012 | 56 | 2012 |
| Elucidating quantitative stability/flexibility relationships within thioredoxin and its fragments using a distance constraint model DJ Jacobs, DR Livesay, J Hules, ML Tasayco Journal of molecular biology 358 (3), 882-904, 2006 | 50 | 2006 |
| On the role of structural class of a protein with two‐state folding kinetics in determining correlations between its size, topology, and folding rate AY Istomin, DJ Jacobs, DR Livesay Protein Science 16 (11), 2564-2569, 2007 | 48 | 2007 |
| The evolutionary origins and catalytic importance of conserved electrostatic networks within TIM‐barrel proteins DR Livesay, D La Protein science 14 (5), 1158-1170, 2005 | 44 | 2005 |
| Redistribution of flexibility in stabilizing antibody fragment mutants follows Le Chatelier's principle T Li, MB Tracka, S Uddin, J Casas-Finet, DJ Jacobs, DR Livesay Biophysical Journal 106 (2), 651a, 2014 | 43 | 2014 |
| Allosteric response is both conserved and variable across three CheY orthologs JM Mottonen, DJ Jacobs, DR Livesay Biophysical journal 99 (7), 2245-2254, 2010 | 41 | 2010 |
| A critical evaluation of correlated mutation algorithms and coevolution within allosteric mechanisms DR Livesay, KE Kreth, AA Fodor Allostery: Methods and Protocols, 385-398, 2012 | 40 | 2012 |
| Unifying mechanical and thermodynamic descriptions across the thioredoxin protein family JM Mottonen, M Xu, DJ Jacobs, DR Livesay PROTEINS: Structure, Function, and Bioinformatics 75 (3), 610-627, 2009 | 39 | 2009 |
