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Akihiko Nakamura
Akihiko Nakamura
Department of Applied Life Sciences, Faculty of Agriculture Shizuoka University
Verified email at shizuoka.ac.jp
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Cited by
Cited by
Year
“Newton’s cradle” proton relay with amide–imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
A Nakamura, T Ishida, K Kusaka, T Yamada, S Fushinobu, I Tanaka, ...
Science advances 1 (7), e1500263, 2015
982015
The tryptophan residue at the active site tunnel entrance of Trichoderma reesei cellobiohydrolase Cel7A is important for initiation of degradation of crystalline cellulose
A Nakamura, T Tsukada, S Auer, T Furuta, M Wada, A Koivula, K Igarashi, ...
Journal of Biological Chemistry 288 (19), 13503-13510, 2013
952013
Trade-off between processivity and hydrolytic velocity of cellobiohydrolases at the surface of crystalline cellulose
A Nakamura, H Watanabe, T Ishida, T Uchihashi, M Wada, T Ando, ...
Journal of the American Chemical Society 136 (12), 4584-4592, 2014
892014
Single-molecule imaging analysis of elementary reaction steps of Trichoderma reesei cellobiohydrolase I (Cel7A) hydrolyzing crystalline cellulose Iα and IIII
Y Shibafuji, A Nakamura, T Uchihashi, N Sugimoto, S Fukuda, ...
Journal of Biological Chemistry 289 (20), 14056-14065, 2014
652014
Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin
A Nakamura, K Okazaki, T Furuta, M Sakurai, R Iino
Nature Communications 9 (1), 3814, 2018
622018
Single-molecule imaging analysis of binding, processive movement, and dissociation of cellobiohydrolase Trichoderma reesei Cel6A and its domains on crystalline cellulose
A Nakamura, T Tasaki, D Ishiwata, M Yamamoto, Y Okuni, A Visootsat, ...
Journal of Biological Chemistry 291 (43), 22404-22413, 2016
542016
Positive charge introduction on the surface of thermostabilized PET hydrolase facilitates PET binding and degradation
A Nakamura, N Kobayashi, N Koga, R Iino
ACS Catalysis 11 (14), 8550-8564, 2021
512021
Single-nanoparticle tracking with angstrom localization precision and microsecond time resolution
J Ando, A Nakamura, A Visootsat, M Yamamoto, C Song, K Murata, R Iino
Biophysical journal 115 (12), 2413-2427, 2018
402018
3-connectivity augmentation problems
T Watanabe, A Nakamura
1988 IEEE International Symposium on Circuits and Systems (ISCAS), 1847-1850, 1988
391988
Convergent evolution of processivity in bacterial and fungal cellulases
T Uchiyama, T Uchihashi, A Nakamura, H Watanabe, S Kaneko, ...
Proceedings of the National Academy of Sciences 117 (33), 19896-19903, 2020
332020
Structural and biochemical analyses of glycoside hydrolase family 26 β-mannanase from a symbiotic protist of the termite Reticulitermes speratus
H Tsukagoshi, A Nakamura, T Ishida, KK Touhara, M Otagiri, S Moriya, ...
Journal of Biological Chemistry 289 (15), 10843-10852, 2014
322014
The GH26 β-mannanase RsMan26H from a symbiotic protist of the termite Reticulitermes speratus is an endo-processive mannobiohydrolase: heterologous expression and characterization
H Tsukagoshi, A Nakamura, T Ishida, M Otagiri, S Moriya, M Samejima, ...
Biochemical and Biophysical Research Communications 452 (3), 520-525, 2014
292014
Rate constants, processivity, and productive binding ratio of chitinase A revealed by single-molecule analysis
A Nakamura, T Tasaki, Y Okuni, C Song, K Murata, T Kozai, M Hara, ...
Physical Chemistry Chemical Physics 20 (5), 3010-3018, 2018
282018
Development of simple random mutagenesis protocol for the protein expression system in Pichia pastoris
M Tachioka, N Sugimoto, A Nakamura, N Sunagawa, T Ishida, ...
Biotechnology for Biofuels 9, 1-10, 2016
232016
Multicolor High-Speed Tracking of Single Biomolecules with Silver, Gold, and Silver–Gold Alloy Nanoparticles
J Ando, A Nakamura, M Yamamoto, C Song, K Murata, R Iino
ACS Photonics 6 (11), 2870-2883, 2019
222019
Single-molecule imaging and manipulation of biomolecular machines and systems
R Iino, T Iida, A Nakamura, E Saita, H You, Y Sako
Biochimica et Biophysica Acta (BBA)-General Subjects 1862 (2), 241-252, 2018
212018
Domain architecture divergence leads to functional divergence in binding and catalytic domains of bacterial and fungal cellobiohydrolases
A Nakamura, D Ishiwata, A Visootsat, T Uchiyama, K Mizutani, S Kaneko, ...
Journal of Biological Chemistry 295 (43), 14606-14617, 2020
192020
Lytic polysaccharide monooxygenase increases cellobiohydrolases activity by promoting decrystallization of cellulose surface
T Uchiyama, T Uchihashi, T Ishida, A Nakamura, JV Vermaas, ...
Science Advances 8 (51), eade5155, 2022
182022
Small stepping motion of processive dynein revealed by load-free high-speed single-particle tracking
J Ando, T Shima, R Kanazawa, R Shimo-Kon, A Nakamura, M Yamamoto, ...
Scientific reports 10 (1), 1080, 2020
182020
Phase-diagram-guided method for growth of a large crystal of glycoside hydrolase family 45 inverting cellulase suitable for neutron structural analysis
A Nakamura, T Ishida, S Fushinobu, K Kusaka, I Tanaka, K Inaka, ...
Journal of Synchrotron Radiation 20 (6), 859-863, 2013
182013
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