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Riza M. Daza
Riza M. Daza
Verified email at uw.edu
Title
Cited by
Cited by
Year
Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-18, 2007
22492007
High-quality draft assemblies of mammalian genomes from massively parallel sequence data
S Gnerre, I MacCallum, D Przybylski, FJ Ribeiro, JN Burton, BJ Walker, ...
Proceedings of the National Academy of Sciences 108 (4), 1513-1518, 2011
18892011
Cell-free DNA comprises an in vivo nucleosome footprint that informs its tissues-of-origin
MW Snyder, M Kircher, AJ Hill, RM Daza, J Shendure
Cell 164 (1), 57-68, 2016
12892016
Comprehensive single-cell transcriptional profiling of a multicellular organism
J Cao, JS Packer, V Ramani, DA Cusanovich, C Huynh, R Daza, X Qiu, ...
Science 357 (6352), 661-667, 2017
12692017
Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing
DA Cusanovich, R Daza, A Adey, HA Pliner, L Christiansen, ...
Science 348 (6237), 910-914, 2015
11752015
Joint profiling of chromatin accessibility and gene expression in thousands of single cells
J Cao, DA Cusanovich, V Ramani, D Aghamirzaie, HA Pliner, AJ Hill, ...
Science 361 (6409), 1380-1385, 2018
7552018
Accurate classification of BRCA1 variants with saturation genome editing
GM Findlay, RM Daza, B Martin, MD Zhang, AP Leith, M Gasperini, ...
Nature 562 (7726), 217-222, 2018
6932018
A single-cell atlas of in vivo mammalian chromatin accessibility
DA Cusanovich, AJ Hill, D Aghamirzaie, RM Daza, HA Pliner, JB Berletch, ...
Cell 174 (5), 1309-1324. e18, 2018
6842018
Fragment length of circulating tumor DNA
HR Underhill, JO Kitzman, S Hellwig, NC Welker, R Daza, DN Baker, ...
PLoS genetics 12 (7), e1006162, 2016
6342016
Cicero predicts cis-regulatory DNA interactions from single-cell chromatin accessibility data
HA Pliner, JS Packer, JL McFaline-Figueroa, DA Cusanovich, RM Daza, ...
Molecular cell 71 (5), 858-871. e8, 2018
5952018
A human cell atlas of fetal gene expression
J Cao, DR O’day, HA Pliner, PD Kingsley, M Deng, RM Daza, MA Zager, ...
Science 370 (6518), eaba7721, 2020
5012020
Decoding long nanopore sequencing reads of natural DNA
AH Laszlo, IM Derrington, BC Ross, H Brinkerhoff, A Adey, IC Nova, ...
Nature biotechnology 32 (8), 829-833, 2014
4822014
The cis-regulatory dynamics of embryonic development at single-cell resolution
DA Cusanovich, JP Reddington, DA Garfield, RM Daza, D Aghamirzaie, ...
Nature 555 (7697), 538-542, 2018
3402018
Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing
A Kirby, A Gnirke, DB Jaffe, V Barešová, N Pochet, B Blumenstiel, C Ye, ...
Nature genetics 45 (3), 299-303, 2013
3062013
A human cell atlas of fetal chromatin accessibility
S Domcke, AJ Hill, RM Daza, J Cao, DR O’Day, HA Pliner, KA Aldinger, ...
Science 370 (6518), eaba7612, 2020
2922020
Massively multiplex chemical transcriptomics at single-cell resolution
SR Srivatsan, JL McFaline-Figueroa, V Ramani, L Saunders, J Cao, ...
Science 367 (6473), 45-51, 2020
2462020
In vitro, long-range sequence information for de novo genome assembly via transposase contiguity
A Adey, JO Kitzman, JN Burton, R Daza, A Kumar, L Christiansen, ...
Genome research 24 (12), 2041-2049, 2014
1752014
Precise genomic deletions using paired prime editing
J Choi, W Chen, CC Suiter, C Lee, FM Chardon, W Yang, A Leith, ...
Nature Biotechnology 40 (2), 218-226, 2022
1662022
Copy-number variation and false positive prenatal aneuploidy screening results
MW Snyder, LVE Simmons, JO Kitzman, BP Coe, JM Henson, RM Daza, ...
New England Journal of Medicine 372 (17), 1639-1645, 2015
1642015
Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome
EP Hamilton, A Kapusta, PE Huvos, SL Bidwell, N Zafar, H Tang, ...
elife 5, e19090, 2016
1422016
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