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Adrian L. Sanborn
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A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping
SSP Rao, MH Huntley, NC Durand, EK Stamenova, ID Bochkov, ...
Cell 159 (7), 1665-1680, 2014
74982014
Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes
AL Sanborn, SSP Rao, SC Huang, NC Durand, MH Huntley, AI Jewett, ...
Proceedings of the National Academy of Sciences 112 (47), E6456-E6465, 2015
16962015
Cohesin loss eliminates all loop domains
SSP Rao, SC Huang, BG St Hilaire, JM Engreitz, EM Perez, ...
Cell 171 (2), 305-320. e24, 2017
16542017
Structural insights into µ-opioid receptor activation
W Huang, A Manglik, AJ Venkatakrishnan, T Laeremans, EN Feinberg, ...
Nature 524 (7565), 315-321, 2015
8992015
The energetics and physiological impact of cohesin extrusion
L Vian, A Pękowska, SSP Rao, KR Kieffer-Kwon, S Jung, L Baranello, ...
Cell 173 (5), 1165-1178. e20, 2018
5312018
Deletion of DXZ4 on the human inactive X chromosome alters higher-order genome architecture
EM Darrow, MH Huntley, O Dudchenko, EK Stamenova, NC Durand, ...
Proceedings of the National Academy of Sciences 113 (31), E4504-E4512, 2016
2882016
ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL
G Wutz, R Ladurner, BG St Hilaire, RR Stocsits, K Nagasaka, B Pignard, ...
Elife 9, e52091, 2020
1202020
Simple biochemical features underlie transcriptional activation domain diversity and dynamic, fuzzy binding to Mediator
AL Sanborn, BT Yeh, JT Feigerle, CV Hao, RJL Townshend, ...
Elife 10, e68068, 2021
1032021
Analysis of Hi-C data using SIP effectively identifies loops in organisms from C. elegans to mammals
MJ Rowley, A Poulet, MH Nichols, BJ Bixler, AL Sanborn, EA Brouhard, ...
Genome research 30 (3), 447-458, 2020
752020
Integrated intracellular organization and its variations in human iPS cells
MP Viana, J Chen, TA Knijnenburg, R Vasan, C Yan, JE Arakaki, M Bailey, ...
Nature 613 (7943), 345-354, 2023
632023
Deep learning for semantic similarity
A Sanborn, J Skryzalin
CS224d: Deep Learning for Natural Language Processing Stanford, CA, USA …, 2015
512015
Proof of Han's hook expansion conjecture
K Carde, J Loubert, A Potechin, A Sanborn
arXiv preprint arXiv:0808.0928, 2008
102008
Author Correction: Structural insights into μ-opioid receptor activation
W Huang, A Manglik, AJ Venkatakrishnan, T Laeremans, EN Feinberg, ...
Nature 584 (7820), E16-E16, 2020
82020
Methods and compositions for altering function and structure of chromatin loops and/or domains
EL Aiden, ES Lander, S Rao, SC Huang, AL Sanborn, NC Durand, ...
US Patent 11,214,800, 2022
72022
Chromatin Extrusion Explains Key Features of Loop and Domain Formation in Wild‐type and Engineered Genomes
A Sanborn, S Rao, SC Huang, N Durand, M Huntley, A Jewett, I Bochkov, ...
The FASEB Journal 30, 588.1-588.1, 2016
42016
ATOM-1: A foundation model for RNA structure and function built on chemical mapping data
N Boyd, BM Anderson, B Townshend, R Chow, CJ Stephens, R Rangan, ...
bioRxiv, 2023.12. 13.571579, 2023
22023
Mapping variation in the morphological landscape of human cells with optical pooled CRISPRi screening
RLD Labitigan, AL Sanborn, CV Hao, CK Chan, NM Belliveau, EM Brown, ...
bioRxiv, 2022.12. 27.522042, 2022
22022
Systems and methods to identify transcription factor activation domains and uses thereof
RD Kornberg, A Sanborn, B Yeh
US Patent 11,732,381, 2023
2023
Methods and compositions for altering function and structure of chromatin loops and/or domains
EL Aiden, ES Lander, S Rao, SC Huang, AL Sanborn, NC Durand, ...
US Patent App. 17/398,951, 2022
2022
Prediction and Mechanistic Dissection of Transcriptional Activation Domains Using Deep Learning and Pooled Screening
AL Sanborn
Stanford University, 2021
2021
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