| Mucosal genomics implicate lymphocyte activation and lipid metabolism in refractory environmental enteric dysfunction Y Haberman, NT Iqbal, S Ghandikota, I Mallawaarachchi, T Braun, ... Gastroenterology 160 (6), 2055-2071. e0, 2021 | 53 | 2021 |
| Inhibition of Aurora Kinase B attenuates fibroblast activation and pulmonary fibrosis RK Kasam, S Ghandikota, D Soundararajan, GB Reddy, SK Huang, ... EMBO Molecular Medicine 12 (9), e12131, 2020 | 33 | 2020 |
| Mucosal inflammatory and wound healing gene programmes reveal targets for stricturing behaviour in paediatric Crohn’s disease Y Haberman, P Minar, R Karns, PJ Dexheimer, S Ghandikota, S Tegge, ... Journal of Crohn's and Colitis 15 (2), 273-286, 2021 | 28 | 2021 |
| Inhibition of PDIA3 in club cells attenuates osteopontin production and lung fibrosis A Kumar, E Elko, SR Bruno, ZF Mark, N Chamberlain, BK Mihavics, ... Thorax 77 (7), 669-678, 2022 | 26 | 2022 |
| Comprehensive functional annotation of susceptibility variants associated with asthma Y Gautam, Y Afanador, S Ghandikota, TB Mersha Human genetics 139, 1037-1053, 2020 | 22 | 2020 |
| GENEASE: real time bioinformatics tool for multi-omics and disease ontology exploration, analysis and visualization S Ghandikota, GKK Hershey, TB Mersha Bioinformatics 34 (18), 3160-3168, 2018 | 19 | 2018 |
| Consensus gene co-expression network analysis identifies novel genes associated with severity of fibrotic lung disease S Ghandikota, M Sharma, HH Ediga, SK Madala, AG Jegga International Journal of Molecular Sciences 23 (10), 5447, 2022 | 17 | 2022 |
| Secondary analysis of transcriptomes of SARS-CoV-2 infection models to characterize COVID-19 S Ghandikota, M Sharma, AG Jegga Patterns 2 (5), 2021 | 8 | 2021 |
| Pan-transcriptome-based candidate therapeutic discovery for idiopathic pulmonary fibrosis Y Wang, JK Yella, S Ghandikota, TC Cherukuri, HH Ediga, SK Madala, ... Therapeutic Advances in Respiratory Disease 14, 1753466620971143, 2020 | 8 | 2020 |
| PAMAM: power analysis in multiancestry admixture mapping Y Gautam, S Ghandikota, S Chen, TB Mersha Genetic epidemiology 43 (7), 831-843, 2019 | 8 | 2019 |
| MI-MAAP: marker informativeness for multi-ancestry admixed populations S Chen, S Ghandikota, Y Gautam, TB Mersha BMC bioinformatics 21, 1-14, 2020 | 4 | 2020 |
| GraMDTA: Multimodal graph neural networks for predicting drug-target associations JK Yella, SK Ghandikota, AG Jegga 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2022 | 3 | 2022 |
| AllergyGenDB: A literature and functional annotation-based omics database for allergic diseases S Chen, S Ghandikota, Y Gautam, TB Mersha Allergy 75 (7), 1789, 2020 | 3 | 2020 |
| Application of artificial intelligence and machine learning in drug repurposing. SK Ghandikota, AG Jegga Progress in Molecular Biology and Translational Science 205, 171-211, 2024 | 2 | 2024 |
| Computational workflow for functional characterization of COVID-19 through secondary data analysis S Ghandikota, M Sharma, AG Jegga STAR protocols 2 (4), 100873, 2021 | 2 | 2021 |
| A multi-context feature learning approach to identify disease-specific gene neighborhoods S Ghandikota, AG Jegga Proceedings of the 11th ACM International Conference on Bioinformatics …, 2020 | 2 | 2020 |
| LEI: A Novel Allele Frequency-Based Feature Selection Method for Multi-ancestry Admixed Populations MJ Wathen, Y Gautam, S Ghandikota, MB Rao, TB Mersha SCIENTIFIC REPORTS 9 (11103), 2019 | 2 | 2019 |
| SEMA3B inhibits TGFβ-induced extracellular matrix protein production and its reduced levels are associated with a decline in lung function in IPF DJK Yombo, S Ghandikota, CP Vemulapalli, P Singh, AG Jegga, ... American Journal of Physiology-Cell Physiology 326 (6), C1659-C1668, 2024 | 1 | 2024 |
| Transcriptome analysis in acute gastrointestinal graft-versus host disease reveals a unique signature in children and shared biology with pediatric inflammatory bowel disease P Khandelwal, DT Lounder, A Bartlett, Y Haberman, AG Jegga, ... Haematologica 108 (7), 1803, 2023 | 1 | 2023 |
| Multimodal feature learning framework for disease biomarker discovery S Ghandikota, JK Yella, AG Jegga 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2022 | 1 | 2022 |
